Roseitalea porphyridii: E0E05_11125
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Entry
E0E05_11125 CDS
T05862
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K15546
XRE family transcriptional regulator, aerobic/anaerobic benzoate catabolism transcriptional regulator
Organism
rpod
Roseitalea porphyridii
Brite
KEGG Orthology (KO) [BR:
rpod00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rpod03000
]
E0E05_11125
Transcription factors [BR:
rpod03000
]
Prokaryotic type
Helix-turn-helix
XRE family
E0E05_11125
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SKI
HTH_3
AAA_18
HTH_31
HTH_19
HTH_25
AAA_33
AAA
AAA_16
AAA_17
AAA_29
Motif
Other DBs
NCBI-ProteinID:
QBK31100
UniProt:
A0A4P6V3N6
LinkDB
All DBs
Position
complement(2273812..2274738)
Genome browser
AA seq
308 aa
AA seq
DB search
MPAVSEITNFKGVAQQTGGESQTEIMVGALMKRVGERVRRARELKGIPRRVLSDISGVSP
RYLAQLESGEGNISIGLLQKVAIALDYRIEWFVCAEDPWSSDTMRVTNLFRRAGYQTRQE
VLDLLAPDTEADMRAQRVCLIGMRGAGKSTLGAMAGATLGVPFVELNREIEEQSGMPINE
LVAFYGQEGYRKLESQALERVVATHDAMILAVAGGIVSDPQTYAMLLNHFHTVWLKATPE
DHMERVLAQGDTRPMAGNPEAMDQLKSILTSRETLYGRALSHIDTSGKSLAETHDELVAV
IRERGFLQ
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgcccgcagtgagcgaaataacgaacttcaagggcgtggcccagcagaccggcggcgaa
agccagaccgagatcatggtcggcgccctgatgaagcgggtgggtgagcgggtgcgcagg
gcacgcgagctcaagggcattccgcgccgcgtgctgtcggacatttccggcgtctcgccg
cgctatctggcgcagctcgaatcgggcgagggcaacatctccatcggccttctccagaaa
gtggcgatcgcgctcgactaccggatcgaatggttcgtgtgcgccgaggatccctggtcg
tcggacacgatgcgcgtcaccaacctgttccgcagggccggctaccagacgcgccaggag
gttcttgacctgctcgcccccgataccgaggcggacatgcgggcgcagcgcgtctgtctg
atcgggatgcgcggggctggcaagtcgaccctcggcgccatggccggggcgacgctgggc
gtgccgttcgttgaactcaaccgcgagatcgaggagcagagcggaatgccgatcaacgag
cttgtcgccttctacggccaggagggctatcgcaagctcgaatcgcaggcgctcgaacgg
gtcgttgcaacccatgacgcgatgatcctggcggttgcgggcggcatcgtgtccgatccg
cagacctatgcgatgctgctcaaccatttccacacggtctggctgaaggcgacgcccgag
gatcacatggaacgcgtgctcgcccagggcgacacgcggccgatggccggcaatccggag
gcgatggatcagctcaagtcgatcctgacgagccgggaaacgctctacgggcgggccttg
tcccacatcgacaccagtggcaagtcgctcgccgagacccatgacgaactggtcgccgtg
atcagggagcgcgggttcctgcaatag
DBGET
integrated database retrieval system
