Roseitalea porphyridii: E0E05_13120
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Entry
E0E05_13120 CDS
T05862
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rpod
Roseitalea porphyridii
Pathway
rpod03420
Nucleotide excision repair
rpod03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rpod00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
E0E05_13120
03430 Mismatch repair
E0E05_13120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rpod03400
]
E0E05_13120
Enzymes [BR:
rpod01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
E0E05_13120
DNA repair and recombination proteins [BR:
rpod03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
E0E05_13120
MMR (mismatch excision repair)
Other MMR factors
E0E05_13120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
Viral_helicase1
AAA_11
Motif
Other DBs
NCBI-ProteinID:
QBK31464
UniProt:
A0A4P6V3U3
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All DBs
Position
2703989..2706667
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AA seq
892 aa
AA seq
DB search
MSNPFDDIPFDDAHRPAPAPKPAGGGSGIAARAMGARSAPAYLEGLNPEQRRAVETTEGP
VLVLAGAGTGKTRVLTTRIAHILAQGLAWPSQVLAVTFTNKAAREMKERIGLLVGGAVEG
MPWLGTFHSIGVKMLRRHAELVGLKSDFTILDTDDQIRLLKQLIQAEGLDDKRWPARQFA
HMIDGWKNKGWGPADIPEGDARAFANGKGRELFTAYQNRLKTLNACDFGDLLCHPIRLLK
ANPDVLADYQHKFRYILVDEYQDTNTAQYLWLRLLAQRRVSPHRQPVEERGETASPPLRQ
AQDEGLHRSPASPLMGEAGEASEAKLIRVGETGGDTPPPLTPPPHGVGGGPNGAPPNICC
VGDDDQSIYGWRGADVDNILRFEKDFPGASVVKLERNYRSTAHILGAASHLIGHNEGRLG
KTLFTEAPDPDDPKVNVHAAWDSEEEARAVGETIERHQRDGHLLNDMAILVRASFQMREF
EDRFVTLGLNYRVIGGPRFYERMEVRDAMAYFRVVCQPADDLAFERIVNTPKRGLGDASV
RLVHDYARKKGVPMLAAAEELVATEEMKPKPRAALRDLVQSFRRWQELLDNTPHAELAET
ILEESGYTAMWQADRSAEAPGRLENLKELIRSMEEFESMRAFLEHVSLVMDAEQNEDMDA
VSIMTLHAAKGLEFDTVFLPGWEEGLFPHQRALDEGGRSGLEEERRLAYVGLTRAKRHCH
IWFVSNRRIHGLWQSTIPSRFLDELPTDHVDVAEPPSSYGGYGGYGASRFDRAEAFASTR
ESPGWRRAQANRTEATSRNWGSRSGVAVERIGYGEADSGFGAGRGSVKGRVIEGELIAKS
VSKTASDFSVGDRVFHLKFGNGNVTAIEGNKLTIAFDRAGEKKVLDGFVERV
NT seq
2679 nt
NT seq
+upstream
nt +downstream
nt
atgagcaatccgttcgacgacatcccgttcgacgatgcgcaccggcccgcccctgccccc
aaaccggccggcggcggctcgggcatcgccgcgcgcgccatgggcgcgcggtcagcgccc
gcctatctggaagggctcaaccccgagcagcgccgcgccgtcgagaccaccgaaggcccg
gtcctggtgctggccggcgccggcaccggcaagacgcgcgtgctgaccacgcgcatcgcc
catatcctggcgcaggggcttgcctggcccagccaggtgctggccgtgaccttcaccaac
aaggccgcccgcgagatgaaggagcgcatcggcctgctggtcggcggcgccgtcgagggc
atgccctggctcggcacgttccactcgatcggcgtgaagatgctgcgccggcacgccgaa
ctggtcgggctgaagtccgatttcacgatcctcgacacggacgaccagatacggcttctc
aagcagctcatccaggccgaggggctcgacgacaagcgctggccggcgcgccaattcgcc
cacatgatcgacggctggaagaacaagggctggggtcctgccgacattcccgagggcgac
gcgcgcgccttcgccaacggaaaaggtcgcgagctgttcaccgcctaccagaaccggctg
aagacgctgaacgcgtgcgatttcggcgatctgctgtgccacccgatccgcctgctcaag
gccaatccggacgtgctcgccgactatcagcacaagttcagatacattctcgtcgacgag
taccaggacaccaacaccgcgcaatatctgtggctgcggctgctggcgcagcggcgggtt
tcacctcatcgtcagcctgtcgaagaacgaggtgaaaccgcaagcccgccccttcgacaa
gctcaggatgagggcttgcatcgctcccccgcctcccccttgatgggggaggccggagaa
gcaagcgaagcgaagctgatccgggtgggggagacgggcggggatacacccccacccctg
acccctccccctcatggagtgggagggggaccaaacggcgcgccccccaacatctgctgc
gtcggcgacgacgaccagtcgatctatggctggcgcggggccgacgtcgacaacatactg
cgcttcgaaaaggactttccgggcgcgagcgtcgtcaagctggagcgcaactaccgctcg
accgcccacattctgggcgccgcttcgcacctgatcggccacaatgagggccggctcggc
aagacgctgttcaccgaggcgcccgatccggatgatccgaaggtcaacgtgcacgccgcc
tgggactccgaagaggaggcgcgcgcggtcggcgagacgatcgagcgccaccagcgcgac
ggtcatctgctcaacgacatggcgatcctggtgcgcgcctcctttcagatgcgcgagttc
gaggaccggttcgtcacgctggggctgaactaccgcgtcatcggcggcccgcgcttctac
gagcgcatggaggtgcgcgacgcgatggcctatttccgcgtcgtgtgccagccggccgac
gatctggccttcgagcgcatcgtcaacacccccaagcgcgggctcggcgacgcctcggtt
cgcctcgtgcacgactatgcgcgcaagaagggcgtgccgatgctcgccgcggccgaggaa
ctggtcgccaccgaggagatgaagcccaagccgcgcgccgccctgcgcgatctggtgcag
agcttccgccgttggcaggaactgctcgacaacacgccccatgccgaactggccgagacc
atcctcgaggagagcggctacaccgccatgtggcaggccgaccgttccgccgaggcgccg
gggcggcttgaaaacctcaaggaactcatccgctcgatggaggagttcgaatccatgcgc
gccttcctcgaacatgtcagcctggtcatggacgccgagcagaacgaggacatggacgcg
gtgtcgatcatgacgctgcacgcggccaagggcctcgaattcgacacggtcttcctgccc
ggctgggaggagggtctgttcccgcaccagcgggcgcttgacgaaggcggccggtcgggt
ctggaggaagaacgccggctcgcctatgtcggcctgacccgcgccaagcgccactgccac
atctggttcgtctccaaccgccgcatccacggcctctggcagtcgaccatcccctcgcgc
tttctcgacgaactgccgaccgatcatgtcgacgtcgccgagccgccctcgtcctacggc
ggctatggcggctacggcgcctcccgcttcgaccgggccgaggcctttgcgagcacgcgc
gaatcgcccggctggcgccgcgcccaggccaaccggaccgaagcgaccagccgcaactgg
ggctcgcgctcgggcgtcgccgtcgagcgcatcggctatggcgaagcggattcgggcttc
ggcgccggcaggggctcggtgaagggccgggtgatcgagggcgaactgatcgccaagtcg
gtctccaagacggcatcggacttttccgtcggcgaccgcgtgttccacctcaagttcggc
aacggcaacgtcaccgccatcgagggcaacaagctgaccatcgccttcgaccgcgccggc
gagaagaaggtgctggacgggttcgtggagcgggtgtga
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