Rhodophyticola porphyridii: ABWH90_01410
Help
Entry
ABWH90_01410 CDS
T11241
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase family protein
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
rpoh Rhodophyticola porphyridii
Pathway
rpoh00550
Peptidoglycan biosynthesis
rpoh01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rpoh00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
ABWH90_01410
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rpoh01002
]
ABWH90_01410
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rpoh01011
]
ABWH90_01410
Enzymes [BR:
rpoh01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
ABWH90_01410
Peptidases and inhibitors [BR:
rpoh01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
ABWH90_01410
Peptidoglycan biosynthesis and degradation proteins [BR:
rpoh01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
ABWH90_01410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
PBP5_C
Beta-lactamase2
Peptidase_S13
Motif
Other DBs
NCBI-ProteinID:
XHC06930
LinkDB
All DBs
Position
259129..260301
Genome browser
AA seq
390 aa
AA seq
DB search
MIAFARSVLAAIALLALTTGGLAFETEAEAAYVVDHNTGQVLLSHNDQLPLPPASMSKLM
TLNMVFEALEDGRLSLETRLPVSAHAMSFGGSTMFLTTRDRVSVEDLIRGIVVLSGNDAS
VVFAEALSPDGTEEGFATMMTERARQLGMENSTFRNASGWPAPGHVMSMRDLGILAERLI
TEFPQYYTYFAETEFPFDGRAPDNRFNRNPLLTLDIGADGLKTGHTQEAGFGLVGSAVQG
NRRVTFVITGMETAGARAREAERIVNWAFRQFAEREVVAAGDVLVEAEVFMGAAPTVGLT
PTEDVTMLVPAVQDGGIEAEVVYRGPIAAPVEAGTELGTLVVRMEGFDDRRIPLVAAETV
ERGGIGIRLGTAARSVLRSILGDGPAPAPS
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgatcgcatttgcccgatccgttcttgccgccatcgcccttcttgcgctgacgaccggc
ggcctggccttcgagaccgaggccgaggcggcttatgtcgtggatcacaataccggacag
gtgctgctgagccataacgatcagctgccgctgccgccggcgtcgatgtccaagctgatg
acgctcaacatggtgttcgaggcgcttgaggatggccgtctgagccttgagacccgcctg
ccggtcagcgcccatgcgatgagcttcggcggatcgaccatgtttctgaccacgcgggac
cgggtgagcgtcgaggatctgatccgcggcatcgtggtgctgtcgggcaatgacgcatcc
gtggttttcgccgaggcgctgtctccggacgggaccgaggaaggcttcgccacgatgatg
accgagcgggcgcggcagctagggatggaaaactcgaccttccggaacgcgtcgggctgg
cccgcgccgggccatgtcatgagcatgcgcgatctgggcattctggccgaacggctgatc
accgagtttccgcaatactacacctatttcgcggagaccgagtttccgttcgatggccgc
gcgcccgacaatcgcttcaaccgcaacccgcttctgacgctggatatcggcgcggacggg
ctgaagacgggccacacgcaggaggccgggttcgggctggttggctccgcggtgcagggc
aaccggcgggtgaccttcgtgatcacgggcatggaaaccgcgggcgcccgcgcgcgggag
gcggagcggatcgtgaactgggccttccgccagttcgcggaacgcgaggtcgtggcggcg
ggcgatgtgctggtcgaggcggaggtgttcatgggcgcggccccgaccgtgggcctgaca
cctaccgaggatgtcacgatgctggtgccggccgtgcaggacggcgggatcgaggcggag
gtcgtctatcggggcccgatcgccgccccggtcgaggccggtacggagctgggcacgctg
gtggtgcggatggaaggatttgacgaccggcggatcccgctggtcgccgccgaaacggtg
gaacgtggcggcatcggcatacggcttggaaccgccgcccgctcggtcctgcgcagcatt
ctgggtgacggcccagccccggcgccaagctga
DBGET
integrated database retrieval system
