Rhodophyticola porphyridii: ABWH90_01520
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Entry
ABWH90_01520 CDS
T11241
Symbol
choX
Name
(GenBank) choline ABC transporter substrate-binding protein
KO
K02002
glycine betaine/proline transport system substrate-binding protein
Organism
rpoh Rhodophyticola porphyridii
Pathway
rpoh02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rpoh00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
ABWH90_01520 (choX)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rpoh02000
]
ABWH90_01520 (choX)
Transporters [BR:
rpoh02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Glycine betaine/proline transporter
ABWH90_01520 (choX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OpuAC
Motif
Other DBs
NCBI-ProteinID:
XHC06950
LinkDB
All DBs
Position
complement(282630..283556)
Genome browser
AA seq
308 aa
AA seq
DB search
MLKLTTTSAIALVMGAGLAAADCETITFSDVGWTDITATTAATTYVLDALGYETDIQVLS
VPVTYTALAAGDIDIFLGNWMPTMEADIAPYREAGTVDTVRANLEGAKYTLATNAAGAAL
GITSFDAIAANADALEAEIFGIEPGNDGNRLILDMIEADAFGLSGFEVVESSEAGMLAQV
ARASDRDEPIVFLGWEPHPMNANFDLTYLEGGDDWFGPNLGGATVYTNTSAGFVEACPNV
GALLQNLEFTLAMENEIMGAILNDGEDPRDAAEAWLSTNRDVLPVWLDGVTTADGGDALE
AVNAALDM
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgctgaaactgacgacaacctccgccatcgcgctggtgatgggtgcgggccttgcggcc
gccgattgcgagacgatcacgttctcggatgtgggctggaccgacatcaccgcgaccacg
gcggcaaccacctatgtgctcgacgcgcttggctacgagacggatattcaggtgctgtcg
gtgccggtgacctataccgcgctggccgccggcgatatcgacatcttccttggcaactgg
atgccgacgatggaggccgatatcgcgccctatcgcgaggcgggcacggtggacacggtc
cgcgcgaaccttgaaggcgcaaaatatacgctggccacgaacgcggccggggcggccctc
gggatcaccagcttcgacgccatcgccgccaatgcggacgcgctggaggccgagatcttc
gggatcgagcccggcaatgacggcaaccggctgatccttgacatgatcgaggcggatgcg
ttcgggctgagcgggttcgaagtggtggaaagctccgaggcgggcatgctggcgcaggtt
gcccgggcatcggaccgcgacgagccgatcgtgttcctgggctgggagccgcacccgatg
aacgcgaatttcgacctgacctatctggagggcggcgacgactggttcggccccaatcta
ggcggggcgacggtatacaccaacacctccgccgggttcgtggaggcctgcccgaatgtg
ggcgcgctcctgcagaacctggagttcacgctggccatggaaaacgagatcatgggggcg
atcctgaacgatggcgaggacccgcgcgatgcggccgaggcgtggctttcgaccaatcgc
gatgtcctgcccgtctggctggacggcgtgaccaccgcagatggcggcgatgcgcttgag
gccgtcaacgccgcgctggacatgtaa
DBGET
integrated database retrieval system
