Rhodophyticola porphyridii: ABWH90_02630
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Entry
ABWH90_02630 CDS
T11241
Name
(GenBank) lytic murein transglycosylase
KO
K08305
peptidoglycan lytic transglycosylase B [EC:
4.2.2.29
]
Organism
rpoh Rhodophyticola porphyridii
Brite
KEGG Orthology (KO) [BR:
rpoh00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rpoh01011
]
ABWH90_02630
Enzymes [BR:
rpoh01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
ABWH90_02630
Peptidoglycan biosynthesis and degradation proteins [BR:
rpoh01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
ABWH90_02630
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SLT_2
PG_binding_1
DUF6893
HU_inhibitor
Motif
Other DBs
NCBI-ProteinID:
XHC08497
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All DBs
Position
512272..513516
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AA seq
414 aa
AA seq
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MHMTRRGVVLGGAAAVLSACLPDIRRTGMREPGADRAMRPSPNAAYDAWVAAFRPRAEAR
GITRATLDAAFRGAGFLPGVVERDRNQTEFTRSLQDYLAIVASPEKVTEGRARLRARQAL
LAEIEGRYGVPAHVVAAIWGVESNYGQRRGDIPVISAVSTLAYDGRRGAFFESQLIAALR
ILQNGDVAPGAMTGSWAGAMGHTQFIPTTFEAYAVDFRGDGRRDIWAEDPTDGLASAAAY
LSGSGWQRGRPWGLEVRLPDGFDTGLAGRGAARGVPAWSALGVRDAAGGGLPDHGAASIL
IPAGPDGPAFIVFRNFSVILRYNNSQNYALGVGYLSDRLAGGAGLRASFPPDRFGLTIAD
RQDLQRRLTALGFDTGGADGVIGPRSEAAIRAYQQSAGLPATGEPSRALLIRLR
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgcacatgacgcggcgcggggtggttctgggcggagcggcggcggttctctcggcatgt
ctgcccgatattcgccggacggggatgcgggagcccggtgccgatcgcgcgatgcggccc
tcccccaacgcggcctatgatgcctgggttgccgcattccgcccgcgggcggaggcgcgg
gggatcacgcgggccacccttgatgcggcgtttcgcggggcgggctttctgcccggggtg
gtggagcgggatcgcaaccagacggagttcacccggagcctgcaggattacctcgccatc
gtggcatcgcccgaaaaggtcacggaaggccgcgcccgtctgcgcgcgcgccaggcgctt
ctggccgagatcgagggccggtatggcgtgccggcccatgtggtggcggcgatctggggg
gtggaaagcaattatggccagcgccggggcgacattccggtgatctccgcggtttcgacc
ctggcctatgacggacggcgcggcgcgtttttcgaaagccagctgatcgcggcgctgcgc
atcctgcaaaacggcgatgtcgcgcccggcgcgatgacgggaagctgggcgggcgccatg
ggtcatacccagttcatccccaccacgttcgaggcctatgccgtggatttccgcggcgac
gggcggcgcgatatctgggccgaggatccgaccgatgggttggcctccgccgcggcctac
ctgtccggctccggctggcagcgggggcggccctgggggctggaggtgcgcctgccggac
gggttcgataccgggctggccgggcgaggggctgcgcgcggcgtgccggcatggtcggcc
ctcggggtgcgcgatgccgctggcggcggcctgccggatcatggcgccgcgtcgatcctc
atcccggcggggccggacggccccgcattcattgtgttccgcaatttcagcgtgatcctg
cgctacaacaattcgcagaattatgccctgggcgtgggctatctgtccgaccggctggcc
ggtggggccggtctgcgcgcgtctttcccgcccgaccgtttcggattgacgatcgccgac
cgccaggacctgcaacgccgcctgacggcgctgggcttcgacaccggcggggccgatggg
gtgatcgggccgcgcagcgaggcggcgatccgcgcctatcagcaaagcgccggcctgccg
gccacgggagagccgtcgcgcgcgctgctgattcggctgcgatag
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