Rhodophyticola porphyridii: ABWH90_03465
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Entry
ABWH90_03465 CDS
T11241
Symbol
aspS
Name
(GenBank) aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
rpoh Rhodophyticola porphyridii
Pathway
rpoh00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
rpoh00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
ABWH90_03465 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rpoh01007
]
ABWH90_03465 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rpoh03016
]
ABWH90_03465 (aspS)
03029 Mitochondrial biogenesis [BR:
rpoh03029
]
ABWH90_03465 (aspS)
Enzymes [BR:
rpoh01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
ABWH90_03465 (aspS)
Amino acid related enzymes [BR:
rpoh01007
]
Aminoacyl-tRNA synthetase
Class II (A)
ABWH90_03465 (aspS)
Transfer RNA biogenesis [BR:
rpoh03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
ABWH90_03465 (aspS)
Prokaryotic type
Other AARSs
ABWH90_03465 (aspS)
Mitochondrial biogenesis [BR:
rpoh03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
ABWH90_03465 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
GAD
DUF4090
Motif
Other DBs
NCBI-ProteinID:
XHC07314
LinkDB
All DBs
Position
679083..680861
Genome browser
AA seq
592 aa
AA seq
DB search
MHAYRSHTCADLNSSHVGQTLRLAGWVHRVRDHGGILFIDLRDHYGMTQVLCDPDSPVFT
QMEAVRSEWCIRIDGEVKARDADLVNTKIPTGEIEVFVRDMEVLGAAAELPLMVFGDQEY
PEETRLRYRYLDLRREVMQENMKLRSDVVASMRRRMWDIGFREFQTPIITASSPEGARDF
LVPSRLHPGKFYALPQAPQQFKQLLMVSGFDKYFQIAPCFRDEDPRADRSPTDFYQLDME
MSFVEQQDVFDTIQPVIKGVFEEFGNGAKVDQDWPQISYKDAALWYGTDKPDLRNPIRMQ
VVSEHFRGSGFAIFAKLLEQEGTEVRAIPAPGGGSRKFCDRMNKFAQEQGLPGMGYIFWR
EADQGDMEAAGPLAKNIGPERTEAIRQQLGLGVGDAAFFLAGRPAQFEAVAGRARVVIGS
ELGLTEENRFAFAWIVDFPLYEADEETGRVDFSHNPFSMPQGGMAALDGDPLEVLGYQYD
LACNGYELVSGAIRNHIPEIMFKAFALAGYGEEEVRKRFGGMVNAFQYGAPPHGGCAAGI
DRIVMLLADTANIREVILFPMNQRAEDLMMNAPSDPTSDQLMELGLRVLPQD
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgcacgcctatcgcagccatacctgcgccgacctgaacagttcccatgtagggcagacc
ttgcgtctggccgggtgggtgcaccgggtgcgcgaccacgggggcatcctgttcatcgac
ctgcgcgatcactacggcatgacgcaggttctgtgcgatcccgacagcccggtcttcacg
cagatggaggccgtgcgctcggaatggtgcatccggatcgacggagaggtgaaggcccgc
gacgccgatctggtgaacaccaagatcccgaccggcgaaatcgaggtcttcgtgcgcgat
atggaggttctgggtgcagcggcggagttgccgctgatggttttcggggatcaggaatat
cccgaggaaacgcggcttcgctaccggtatctggacctgcggcgcgaggtcatgcaggag
aacatgaagctgcgctccgatgtggtggcctccatgcggcggcggatgtgggatatcggc
tttcgcgagttccagacaccgatcatcaccgcctcctcgccggaaggggcgcgcgacttt
ctggtgccctcgcggctgcatccgggcaagttctacgcgctgccccaggccccgcagcag
ttcaagcagctgctcatggtgtccggtttcgacaagtatttccagatcgcgccctgcttc
cgtgacgaagacccgcgcgccgaccgctcgcccacggatttctaccagctcgacatggag
atgagcttcgtcgagcagcaagacgtgttcgacacgatccaacccgtcatcaagggcgtg
ttcgaggagttcggaaacggcgccaaggtcgatcaggactggccgcagatctcctacaag
gatgcggcgctctggtacggcaccgacaagccggacctgcgcaatccgatcaggatgcag
gtggtctccgagcatttccgtggctcggggttcgcgattttcgccaagctgctggagcag
gagggcaccgaggtgcgcgccattcccgcgcccggcggcggcagccgcaagttctgcgac
cggatgaacaagttcgcacaggaacagggcctgccggggatgggatacatcttctggcgt
gaagcggatcagggtgacatggaggccgcgggcccccttgccaagaacatcggccccgag
cggaccgaggcgatccgccagcaacttggtcttggcgtcggcgatgcggctttcttcctc
gccgggcggcccgcgcagttcgaggccgtggcgggccgggcccgcgtggtcatcggctcg
gagcttggtctcaccgaggaaaaccgcttcgccttcgcgtggatcgtggatttcccgctt
tacgaggcggatgaggagaccgggcgggtcgacttctcccacaacccgttctcgatgccg
cagggcgggatggcggcgctcgacggcgacccgctggaggtgctggggtatcagtacgat
ctggcctgcaacgggtacgagctggtttcgggcgcgatccggaaccatattcccgagatc
atgttcaaggcattcgcccttgccggatatggcgaggaggaggtgcgcaagcgcttcggc
gggatggtcaatgccttccaatacggcgcgccgccccatggcggttgtgcggcggggatc
gaccggatcgtgatgcttctggcggatacggccaacatccgggaggtgatcctgttcccg
atgaaccagcgcgccgaagacctgatgatgaatgccccgtcggaccccacaagcgaccag
ttgatggaactgggccttcgggttctgccgcaggattga
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