Rhodophyticola porphyridii: ABWH90_04035
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Entry
ABWH90_04035 CDS
T11241
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rpoh Rhodophyticola porphyridii
Pathway
rpoh03420
Nucleotide excision repair
rpoh03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rpoh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ABWH90_04035
03430 Mismatch repair
ABWH90_04035
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rpoh03400
]
ABWH90_04035
Enzymes [BR:
rpoh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ABWH90_04035
DNA repair and recombination proteins [BR:
rpoh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ABWH90_04035
MMR (mismatch excision repair)
Other MMR factors
ABWH90_04035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
XHC07420
LinkDB
All DBs
Position
791221..794052
Genome browser
AA seq
943 aa
AA seq
DB search
MSSFDESEAFQAASLSARAMAPRAAAYMEGLNPAQRAAVEAVEGPVLMLAGAGTGKTRAL
TARIAHLLATGTARPNEILAVTFTNKAAREMKTRVGALLGQPAEGMPWLGTFHAICVKLL
RRHAELAGLKSNFTILDTDDQVRLMKQLILAENIDEKRWPARMLAGVIDNWKNRAWTPEK
VPAAEAGAFNKRGVELYAAYQARLKALNAVDFGDLLLHIVTIFQENADVLAQYQRWFRYI
LVDEYQDTNVAQYLWLRLLAQSHRNICCVGDDDQSIYGWRGAEVGNILRFEKDFPGAKVV
RLEQNYRSTGHILAAASGVIAGNKDRLGKTLWTEGEDGEKVRLIGHWDGDEEARWVGDKV
ESLVSGTAREALERTNPRSKTILQEFERLAKKGALQGARTTAELFDRLRSQNSTLVEYKT
RKLIWDLTERHKAGEPLSPAFLKYSHEEIAILVRASHQMRAFEDRFLTIGLPYRVIGGPR
FYERMEIRDAMAYFRVVVSPDDDLAFERIVNTPKRGLGDKAQATIQKMARSNGVSLIERA
RLCVEAGAISGKGGKELSVLCSSFSRWSWLLREVGNEVEIERLATDAQLLQAEATKLRRD
FEDEFGEASFSEILTELQSGRSVEAFGAHLVDAVSEWRALRGRAQVLESYCEILRGNHVR
LAEIILDESGYTGHWQNDKTPEAPGRLENLKELVKALEGFENLQGFLEHVALIMDNESDD
GEEKVTLMTLHAAKGLEFSAVFLPGWEDGLFPSQRSMDESGIKGLEEERRLAYVGITRAE
EVCTISFAGNRRVYGQWQSQMPSRFIDELPEEHVEVLTPPGLYGHGGAMSASASPVAGMM
RGSDLHQKAAEANVYNSPGWRRLQANQGQRGMSQPREARNMTIDTEAISAFLLGDRVFHQ
KFGYGRVNAVEGDKVEVAFDKAGIKHVVGRFLTAADSAGDVPF
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atgagcagtttcgacgagtcagaggcgtttcaggccgcgtccctttctgcgcgggcgatg
gcgccccgcgcggcggcctatatggagggcctgaaccccgcgcagcgcgcggcggtggag
gcggtggagggtcctgtgctgatgctggcgggggcgggcacgggcaagacccgcgcgctg
actgcccggatcgcgcatcttctggccacaggcacggcccgccccaacgagatcctcgcc
gtcaccttcaccaacaaggccgcgcgcgagatgaaaacccgtgtcggcgcgcttctgggc
cagccggccgaggggatgccgtggctcggcaccttccatgcgatctgcgtgaagctgctg
cggcggcatgcggaacttgcggggctgaagtcgaattttacgatcttggataccgacgat
caggtgcggctgatgaaacagctgatcctggcggagaatatcgacgaaaaacgctggccc
gcccggatgctggccggtgtcatcgacaattggaaaaaccgcgcctggacacccgaaaag
gtgcccgccgccgaagccggggccttcaacaagcgcggggttgagctttacgccgcctat
caggcccggctgaaagccctgaacgcagtcgatttcggcgatctgcttctccatatcgtg
acgatctttcaggagaacgcggatgttctggcccagtaccagcgctggttccgctacatc
ctcgtggacgagtatcaggataccaatgtcgcgcagtatctctggctgcggctgcttgcc
cagagccaccggaacatctgctgcgtcggcgatgacgaccagtcgatctatggctggcgc
ggggccgaggtgggcaatatcctgcggttcgaaaaggactttccgggtgccaaggtggtg
cggctggaacagaattaccggtcgacagggcatatcctcgccgccgcctccggggtgatt
gcgggcaacaaggaccgcttgggcaagacgctctggaccgagggcgaggatggcgaaaag
gtgcgccttatcggccactgggacggcgatgaggaagcccggtgggtcggcgataaggtc
gaaagccttgttagtggtactgcacgagaggctcttgaacgtactaacccgcgttcaaaa
actattcttcaggaatttgaaaggctcgcgaaaaaaggtgctttgcaaggcgcacgcaca
accgctgaactgttcgaccgtctgcgcagccagaacagcacgcttgttgagtacaaaacc
cggaagctgatttgggatctgaccgagcgtcacaaagctggtgagccgctttcgccggca
tttctgaagtacagccatgaggaaatcgccatcctcgtccgcgccagccaccagatgcgc
gcctttgaggacaggttcctgaccatcgggctgccttaccgcgtgatcggcgggccgcgc
ttttacgagcggatggagatccgcgatgcgatggcctatttccgcgttgtcgtcagcccc
gacgatgacctggccttcgagcggatcgtcaacacgcccaagcgcggcctcggcgacaag
gcgcaggcgacgatccagaagatggcgcggtcgaacggggtcagcctcatcgagcgcgcg
cggctgtgtgtcgaggcgggggcgatttcgggcaagggcggcaaggaactgagcgtctta
tgttcatcgttttcgcgctggagttggcttctccgcgaagtaggcaacgaggttgagatt
gaacgacttgctacggatgcgcagcttctgcaagcagaggcgacgaagcttcgtcgtgat
tttgaggatgagttcggcgaggcctctttctcggaaatcttgacagagttgcaaagcggt
aggagcgttgaggcgttcggggcacatttggttgatgctgtatctgagtggcgcgcactt
cgcggtcgagctcaggttctggaaagctactgcgagattttgaggggcaatcatgtccga
ttggccgagatcatcctcgacgaaagcggctataccggccactggcagaacgacaagacg
cccgaggcgcccggacggctggagaatctgaaggaactggtgaaggcgttggaggggttc
gagaacctgcagggcttcctcgaacacgtcgccctgatcatggacaatgaaagcgacgac
ggcgaggagaaggtcacgctgatgacgctacacgctgccaaggggctggagttttcggcc
gtgtttctgccgggctgggaggatgggctgtttccctctcaacgctccatggacgaatcg
gggatcaagggcctggaggaggagcggcggctggcctatgtcggcatcacccgggccgag
gaggtctgcaccatctcatttgcgggcaaccgccgggtttacggccaatggcaaagccag
atgccctcccgcttcatcgacgaattgcccgaagaacatgtggaggtgcttactccgccg
gggctgtacggccatggcggtgcgatgtcggccagcgcctcgccggtggccggcatgatg
cgcggctcggacctgcaccagaaagcggcggaggcgaatgtctacaactccccgggatgg
cgccgcttgcaggccaatcagggccagcgcgggatgagccagccccgcgaagcccgaaac
atgaccatagataccgaggcgatcagcgcgtttttgctgggtgaccgggtgtttcaccaa
aaattcggctatggccgcgtgaatgcggtagaaggggacaaggtcgaagtcgcgttcgac
aaggccggtatcaagcatgtggtgggccggtttctgaccgccgccgacagcgccggcgac
gtaccgttctga
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