Rhodophyticola porphyridii: ABWH90_04110
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Entry
ABWH90_04110 CDS
T11241
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
rpoh Rhodophyticola porphyridii
Pathway
rpoh00470
D-Amino acid metabolism
rpoh00550
Peptidoglycan biosynthesis
rpoh01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rpoh00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
ABWH90_04110 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
ABWH90_04110 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rpoh01011
]
ABWH90_04110 (murD)
Enzymes [BR:
rpoh01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
ABWH90_04110 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
rpoh01011
]
Precursor biosynthesis
Amino acid ligase
ABWH90_04110 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
2-Hacid_dh_C
TrkA_N
AlaDh_PNT_C
KARI_N
Motif
Other DBs
NCBI-ProteinID:
XHC07435
LinkDB
All DBs
Position
808065..809468
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AA seq
467 aa
AA seq
DB search
MIPVTGFEGAKVAVLGLGRSGLAAARALRAGGADPLVWDDSAAARETAGREGFPLVDPLK
AGALDGVAAMTVSPGIAHLYPDPHPAIMAAWAAGVPVDNDVGLFFRSLAAGDWDRHVTPP
RVIAVTGSNGKSTTAALIHHCLTEAGLPAQLAGNIGVGVLDIEPPEDGEVIVLELSSYQI
DLARALTPDVAVFTNLTPDHLDRHGGMGGYFAAKRRLFAEGGPDRAVIGVDEKEGRYLAN
QLAEGPGDGRLIRVSATSKLTGPGWDVTARKGWLSETRKGRQAASIDLRGVRGLPGVHNH
QNACCAYGALRALGIAPRVIETAFQSFGGLPHRSQIVGERNGVLFVNDSKATNVDAAAKA
LAAFPRVRWICGGLEKEGGLDGLKPVLGSVSKAYVIGREAEGFALKLGDLPVEVCTDMAI
AVARAAAEAEPGETVLLAPAAASFDQYDNFEQRGQDFMDQVAKVLAG
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgatcccggtaactgggtttgaaggcgcgaaggttgcggttctggggcttggccgatcg
ggtctggccgccgcccgggccttgcgcgcgggcggggccgatccgctggtctgggacgac
agcgccgcggcgcgggagaccgccgggcgcgaggggtttccgctcgtcgatccgctcaaa
gccggtgcgctggacggcgtggcggcgatgaccgtctcccccggtatcgcgcatctttac
cccgatcctcacccggcgatcatggcggcctgggcggcgggcgtgccggtggacaacgat
gtggggctgtttttccggtccctcgccgcgggcgactgggaccggcatgttaccccgccc
cgggtgattgcggtcaccgggtcgaacgggaaatccaccaccgccgcgctgatccaccat
tgcctgacggaggccggactgcccgcgcaactggcgggcaatatcggcgtgggggtgctg
gatatcgaacctcccgaggatggcgaggtgatcgtgcttgaactgtcgagctatcagatc
gatctggcgcgcgccctgaccccggatgtggcggtgttcaccaatctcacccccgatcat
cttgatcggcatggcggcatgggcggatatttcgcggccaagcgccggctgtttgccgaa
ggcgggccggaccgggcggtgatcggcgttgacgagaaggaagggcgctatctggccaac
caactggccgaggggccgggcgacgggcggctgatccgggtctccgccacatcgaaactg
acgggtccgggatgggacgtgaccgcgcgcaagggctggttgagcgaaacccggaaaggg
cggcaggcggcgtcgatagatctgcgcggggtccgcgggctgcccggcgtccacaaccac
cagaacgcgtgctgtgcctacggggcgcttcgggcgcttggcatcgcccccagggtgatc
gagacggcgtttcagtccttcggcggtctgcctcatcgcagccagatcgttggcgaacgg
aacggggttctgttcgtgaatgacagcaaggccacgaatgtggatgcggccgccaaggcg
ctggccgccttcccgcgggtgcggtggatctgcggcggtctggagaaagaaggcgggctc
gacgggctgaaaccggtcctcggatcggtgtcgaaggcctatgtgatcgggcgcgaggcg
gaggggttcgccctgaaactgggcgatctgcccgtggaggtctgcaccgatatggcgatt
gcggtcgcccgtgccgcggcggaggccgagccgggcgagacggtgcttctggctccggcc
gcggcgagtttcgatcaatacgataacttcgaacagcgcgggcaggatttcatggatcag
gtcgcgaaggttttggcggggtag
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