Rhodophyticola porphyridii: ABWH90_04980
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Entry
ABWH90_04980 CDS
T11241
Name
(GenBank) Ig-like domain-containing protein
Organism
rpoh Rhodophyticola porphyridii
SSDB
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Paralog
GFIT
Motif
Pfam:
Big_12
Motif
Other DBs
NCBI-ProteinID:
XHC07595
LinkDB
All DBs
Position
971804..978970
Genome browser
AA seq
2388 aa
AA seq
DB search
MCSRARAGFLLLLVLACLAPFARAQAQTLACPSTSAGTAGSAVAQRVDLGAGVCDTSFSL
PSDGILISLETFAARDDIYRITLRIRPADVTAAGFTCAGVMPVQISSSRGSFYLLAYDMP
LNGDAHRCTARYTRGTVEIAIPVESLVAGAGQSKSATLQATSFEPSAGTADTTAPRVLSL
ERHDPVDALVSLGPLTWQIGFDEDVRNLDAGDFSLSGSSAGLSVSAISDRIYRVTAAGGD
LDAVNGPVALQFVPAQDIADVAGNPLADLTPTGANEPGYMLDTTPPGVTILSDAGDASAL
AAIPLEIRFTEPVTGFEAGDLVVSGGTIANLTGSADRYAANLLPAGDGVLRVTLPTGRAT
DAAGLGNLPAPEFSVISDRTAPGVTLASPVSDPSNAARIPVTVSLSEPGVAELTGGDISV
TGAMLEGFQGAGTSYGFDLVPLADGPIRAEIAAGAVRDAAGNGNASAAVQITSDRRAPRL
ASITRATPAEAQTNADRLTWRVVFDEDIANLDAADFVAEGTTAAVSVTPLDARRYDITLS
GGDLATLDGPVSLRLSAASDITDLPGTPIVDLAPIGADEGYLIDNTGPVLTLSGLPGEIT
DAFTATIDFDEPVTGFDIGDITAVNATLSAFSGAGARYEFRVTAGPGGDVRLSVAGGVAL
DAAGNPSAALSEVSLPVDRTPPTVTIAGMPEYLRGPVTLTFTFSEPVSGFTREDITASPA
LTLGAVSALSGSVYSATATPVGAGLVSVSVDGDAVRDGTGNGNFSSDPATGTIDMTAPRL
ISVDRLGPALTNADSLTWSLTFSEDITGVAGAVIGLTGTTALRTATQRVQPQVYHLTFSG
GDLADLPDGTVALDLTDLGAITDGAGNPLDPARPSGNYEVRIDNTAPSQIEARYLSPAEP
VTSADVLTWEIVFDEDVTGLGAADFTVSGTTAAISSVDPVRPDLARVRVSGGDLAGLTGT
VTLGFAAGADIRDGAGNAMPVGTLRHLGAAPGGAAWRVDNTAPVIVASSPTTSPFATGEM
LVHLAFSKPMVFDPGTTPALQIANGSLRDISYPDVQSAVIRIAPGGPGQVEVRVPAGAFR
DEIGLGNAGPVSLSRRFDPETPRLAGITRVFPTTHPSNADRLSWQLVFSEPVSGVDAADF
VLSGSTAGLAVTALGESLYRIEASGGDLATLTGRVTLDFAPGRRIVDAAGNSLLLGGMAD
HLPAPDNWADLDHSPPVIGLGSTTPEPFATGDLRVVMQSDEPLTGFDASVLDLSNGTVTG
QSRTDALTQEITITPAAPGPVTVTLPEGAFRDQAGNPSAARSLSRVYAPDLSGPRIEAIV
RLTPPSLPGNADQLRWRVTFDEDVTGVDAGDLSFQGATPTTVDVLRVSARIYEVDISGGD
IPDLTGAVTLGFAASRDIADLAGNPLGELAVRGADEREIVLDNTRPGVEIDSTAPEPTNA
ASIPVAIRFDEPVGGFDIGDLEVSGATLSGFSGSGALYGVTLAPTGDGPIRLEIGSGAAL
DAAGNLSFAAAGFSRRSDRTAPNGTITGLPPTLTGPAVVDIAFSEPVTGLDAGDIALSNA
RLSGFAGSGASYSATVTPDADGPVAIGLPAGAAVDGAGNGSLASAEMRAVADLSGPGAVL
TGLPDLITGPVTVQIRFDEQVTGFDLAGLAVSNAELSALEGGASSYSVTLTPQGDGPVKL
RVRAAAAVDAAGHANRPSADLSAMADVSRPVVVIGGAGPVVAGPFTATFGFSEPVNGFEP
ADIAATNADISDFAGAGASYTVRITPRSEGPVVIGLAADAALDAAGNGTDAASLNTYADL
NAPVVTIDGLPDPITGAARATIRFSEPVFGFTLADLSTDNAQLSGFSGSDDRYEVTVTPD
ADGPVRLAVAAGGGVDLAGLGNGAVSVELLADLTAPGVTLSGIPAAPGTPYSLAVTFSEP
VTGLTLGDFQTSGADLAGLAGSGAAYSVQVTARMTDHSVFLPAGAAMDAAGHASLASPLF
QMRPDGTRPSLQITGLPDPLRRGQPVPLIFTFSEEVYGFEPADIVLDHAVASQFSGGPRV
FSVTITPDGQGAVTLSVADGAARDGSGEPSMPMALSVEVVEGPDPREDIAAFLAARSRDL
IANQPGLTGFLTGREGGRMAASVTRGHADFALRTAGRGPVWMSLQGARSEDDAGRGTTYA
LAVFGSHWDLGETAILGAMLQFDQAEMTTAGGMSLSGTGWLIGPYFAAQVRSQPLYVEGR
LLYGRTRNEIRPAGGGADRFDGERWLAMLGITGAYHGARVSTLPSLTFSHVRDTQETYRD
GFGARIPLQEVRLSELALGVDFEMPVAWDAGDLTINWGMSGIWSRAEGQGAARAFVREGE
TARGRIDLGYAFDNGHGLTSRARAYLDGIGSADGRLSIGIEARFELEF
NT seq
7167 nt
NT seq
+upstream
nt +downstream
nt
gtgtgcagccgggcccgcgcggggtttctgttgcttctggttctggcctgtctggcgccc
tttgcccgggcgcaggcgcaaaccctggcatgcccgtccacctcggccggcacggcgggg
agcgcggttgcgcagcgcgtcgatctgggtgccggggtctgcgacaccagcttttccctc
ccttccgacgggatcctgatcagtcttgagaccttcgccgcccgcgacgacatctaccgg
atcaccttgcggatcaggcccgccgacgtaaccgccgccggcttcacctgcgccggggtc
atgccggtccagatcagcagttccagaggcagtttctatcttctggcctatgacatgccc
ttgaacggggacgcccatcgctgcacggcccgctacacccgtggtacggtggagatcgcg
atcccggtggaaagccttgtggcgggcgcgggccagagcaagagcgcgacgcttcaggcc
acgagtttcgagccctccgccggcacggccgacaccacagccccccgggttctctcgctc
gaacgccacgatccggtcgacgcgctggtctccttggggccgctgacatggcagatcggc
tttgacgaggatgtgcgcaacctggatgcgggcgatttcagcctgagtggcagttcggcg
ggcctgtcggtcagcgcgatttctgaccggatctaccgggtcaccgccgcgggcggcgat
ctggatgctgtaaatggcccggttgcactgcaattcgtcccggcccaggatatcgcggat
gtggcgggcaatccgctcgcggacctcacgcccaccggagcgaacgaacccggctacatg
ctcgacacgaccccgcccggcgtcacgatcctgagcgacgcgggcgatgcgagcgcactt
gccgccatcccgctggagatccgctttaccgagccggtcaccggtttcgaagccggcgat
ctggtggtcagcggcggcacgattgccaacctcaccggcagtgccgaccgttacgccgcc
aatttgctgcccgcgggcgacggggtgctgcgcgtgaccctgccgacgggacgcgcgacg
gacgcggccggtctgggcaacctgcccgcgccggaattctcggtgatctccgatcggacg
gccccgggcgtcacgcttgcaagcccggtcagcgacccgagcaatgcggcacggatcccc
gtcaccgtcagcctgagcgagccgggcgttgccgagctgaccggtggcgatatctccgtc
accggcgcaatgctcgaagggtttcagggggcgggcacaagttacggcttcgatctggtt
ccgctggcagatggcccgatccgcgcggagatcgcggcgggcgctgtccgcgatgcggcg
ggaaacggaaatgcgtctgcggcggtgcagatcacctcggaccgtcgggcgccgcggctg
gcctcgatcacccgggccactccggccgaggcgcagacgaatgcggaccgtctgacatgg
cgggtggtgttcgacgaggatatcgcaaatctggatgcggcggatttcgtggcggagggc
acgactgccgcggtttcggtcacaccgctcgatgcgcggcgctatgacatcaccctgtcg
ggcggggatctggcgacattggacgggccggtcagcctgcgcctgtcggcggcgagcgat
atcaccgatctgcccgggacaccgattgtcgatcttgcgcccatcggggcggatgaggga
tatctcatcgataataccggcccggtcctgaccctgtcgggcctgccgggcgagataacc
gatgccttcaccgcgaccatagatttcgacgagccggtgacaggtttcgacatcggcgat
atcacagccgtcaacgcgaccctgtcggcgttcagcggtgccggcgcgcgctatgagttc
cgggtgacggcggggccgggcggcgacgtgcgcctctccgtggctgggggcgtcgccctg
gatgccgccggaaacccgagcgcggcgctgagcgaggtcagcctgccggtcgaccggacc
cctccaaccgtgacgatcgccggcatgcccgagtatctgcgcggaccggtgacgctgacc
ttcacattctccgagccggtgagcggcttcacgcgggaggatatcaccgcatcgcccgca
ctgacgctgggcgcggtctcggccctgtcgggctcggtctattccgcgaccgcgacgccg
gtgggcgcgggtctggtgagtgtgtcggtcgacggggacgcggttcgcgacgggactggc
aatggcaatttctcctcggaccccgcgaccgggacgatcgacatgaccgcgccccgcctg
atatcggtcgaccgcctgggccccgcgctcaccaatgcagacagcctgacatggtcgctg
accttttccgaggatatcacaggtgtcgccggggccgtgatcgggctgaccgggaccacg
gcgctccggacggcgacgcaacgggtgcagccgcaggtctatcacctgacgttttcgggc
ggcgatctggccgatctgccggatggcacggtggcgctggatctgaccgatcttggcgcg
atcacggatggggcgggcaacccgctcgacccggcgcggccatcgggcaactatgaggtc
cggattgacaacacggccccgtcccagatcgaggcccgctatctcagccccgcagagccg
gtcacgagcgcggatgttctgacatgggagatcgtgttcgacgaggatgtcaccggtctc
ggcgcggcggattttaccgtgtcgggtacgaccgccgcgatcagctcggtcgatccggtg
cgccccgatctggcgcgggttcgcgtttcgggcggggatctggcagggctgacgggcacg
gtgacgcttggctttgccgccggggcagatatccgtgacggggccggcaatgcgatgccg
gtcgggaccctgcgccacctaggggcggcacccggcggagctgcatggcgggtggacaac
accgcacccgtcatcgtcgccagttcgccgaccacaagccccttcgccaccggggagatg
ctggtgcacctggccttcagcaaacctatggtcttcgatccgggcaccacgcccgcgctc
cagatcgcaaacgggtcgctccgcgatatcagctatcccgacgtgcagagcgccgtgatc
cggatcgcgccgggggggccggggcaggtggaggtgcgcgtccctgcgggggccttccgc
gacgaaatcgggctgggcaatgccggaccggtcagcctgtcgcggcgcttcgacccggaa
accccgaggctggcggggatcacgcgggtcttccccaccacccatcccagcaacgccgac
cggctgagctggcagcttgtcttcagcgagccggtcagcggcgtggatgcggccgatttc
gtcctgtcgggcagcaccgccgggctggccgtcacggcgctgggagagagcctctaccgg
atcgaagcctccggtggcgatctggccacgctgacgggccgtgtgacgctggatttcgcc
cccgggcgccgcatcgtcgatgccgccgggaacagccttttgctgggtgggatggccgat
catctgcccgcacccgacaactgggccgacctggatcacagcccgccggtgatcggcctc
ggctccaccacgccggagccgtttgcgaccggggatctgcgcgtcgtgatgcaaagcgat
gagccgctgacggggttcgacgcctcggtgcttgatctgtccaacgggacggtcaccggc
caaagccggaccgatgcattgacgcaggagatcacgatcacgcccgccgcgcccggcccg
gtgacggtgacgctgcccgagggcgcgtttcgggatcaggcgggcaatccgtcggcggcg
cgcagcctctcgcgggtctatgcgcccgatctgagcggacccaggatcgaggccatcgtc
cggctgaccccgccaagcctgcccggcaatgccgatcaactgcgctggcgcgtgaccttt
gacgaggatgtgaccggcgtcgatgcgggcgatctgagctttcagggggcaaccccgacg
acggtcgatgtgctgcgcgtgtcggcacggatctacgaggtcgatatctccggcggcgat
attccggatctgaccggggcggtgaccctcggctttgccgcttcgcgcgatattgccgat
ctggcgggcaacccgttgggcgagcttgccgtccgcggcgcggatgaacgcgagatcgtg
ctcgacaatacccgccccggcgtggagatcgacagcaccgcgcccgagcccaccaatgcg
gcctcgatcccggttgcgatccggttcgatgaaccggttggcgggttcgatatcggcgat
cttgaggtgagcggcgcgaccctgtccgggttttccggcagcggtgcgctttatggcgtg
acacttgcaccgacgggtgacggtccgatccgtctggaaatcggctcgggtgcggcactt
gacgccgccggcaacctctctttcgccgcagccgggttttcacgccgctccgacaggacc
gcgccgaatggaaccatcaccgggctgccgccgaccctcacaggccctgctgtcgtggac
atcgcgttttcggaaccggtgacgggtttagacgcgggcgacatcgccttgagcaatgcg
cggctgtccgggtttgcgggcagcggtgccagctacagcgcaaccgtcacaccggacgcg
gacggcccggttgcgatcgggcttcccgccggggcggctgtcgacggcgcgggcaacggc
tcgcttgcgtcggcggagatgcgcgcggtggccgatctctccgggcccggcgcggttctg
acgggcctgcccgatctgatcacggggccggttaccgtgcagatccgctttgacgagcag
gtgaccggcttcgatctggcggggctggccgtcagcaatgccgaactcagcgctctggag
ggaggggcctcgtcttatagcgtgacactgacgccgcagggggatgggccggtcaagctc
cgcgtgcgggccgccgccgcggtagatgccgccggacatgccaacagaccctccgccgat
ctcagcgccatggccgatgtcagccgcccggtcgtggtcataggcggtgcggggcccgtg
gtggcagggcccttcacggcgaccttcggcttctcggagccggtcaacgggttcgagcct
gccgatatcgcggcgacgaatgcggatatctcggattttgccggtgccggagccagctat
accgtccgtatcacgccccggtcggaagggccggtggtgatcggtcttgctgccgatgcc
gcgctggatgcggccgggaacggcaccgatgcggcaagtctgaacacatatgccgatctg
aatgcccctgtcgtcacgattgacgggctgccggacccgatcaccggggccgcacgggcg
accatccgcttcagcgagcccgttttcggcttcaccctggccgacctgtccaccgacaat
gcgcaactgtcgggcttttccggcagcgatgaccgctacgaggtgacggtgacgcccgac
gcggacggccctgtccggcttgccgtggcggccggtgggggggtggatctggccgggctc
ggaaacggggccgtatcggtcgagctgctggccgatctgacggcgccaggtgtcacgctg
tcggggataccggcggcgccgggtacgccctatagtctggcggtgacattctccgaaccg
gtcacggggctgacgcttggcgattttcagacatccggcgccgatctggcggggcttgcg
ggcagcggagccgcctattccgtgcaggtcaccgcgcggatgacagaccactccgtcttt
ctgcctgcgggcgcggcgatggacgcggcgggccatgccagccttgcgtccccgctcttt
cagatgcggcctgacggcacccggccctccttgcagatcaccgggctgcccgatccgctg
cgccgcgggcagccggtgcctctgatcttcaccttttcggaagaggtctacggcttcgag
cccgccgatatcgtgctggaccacgcggttgccagccagttttccggcggcccgagggtc
ttcagtgtgacgatcacgccggacgggcagggggcagtgacgctctcggtggcggatggc
gcggcccgggacggctcgggcgagccctccatgcccatggccctgagcgtggaggtggtg
gaggggccggacccgcgcgaggatatcgcggcgtttctggccgcaagatcgcgcgacctg
atcgccaatcaaccggggctgaccggctttctcaccgggcgggagggcgggcgcatggcc
gcgtcggtcacccgggggcacgccgatttcgcgcttcggaccgcagggcgcgggccggtc
tggatgtcgcttcaaggcgcgcgcagcgaagacgatgccgggcggggaaccacctatgcg
ctggcggtgttcggcagccattgggatctgggtgagacggccattctgggcgcgatgctg
caattcgatcaggccgaaatgaccactgctggcgggatgagcctttccgggacgggctgg
ttgatcggcccgtatttcgccgcgcaggtccgcagccagccgctttatgtggaaggtcgc
ctgctttacggacggacgcggaacgagatccgccctgcgggcgggggggccgaccggttc
gacggcgaacgctggctggccatgctgggcatcacgggcgcctatcacggggcgcgcgtg
agcaccctgcccagtctcaccttcagccatgtccgcgacacgcaggagacctaccgggac
ggcttcggcgcgcgcatccccctgcaggaggtgcggttgagcgaactggcgctcggcgtg
gatttcgaaatgccggtggcgtgggatgcgggtgatctgacgatcaactggggtatgtcc
gggatctggtcccgagcggaggggcagggcgcggcgcgggcgttcgtgcgggagggggaa
acggcgcggggcaggatcgatctgggctatgcgttcgacaacgggcacgggctgacctct
cgggcgcgtgcctatctcgacggcatcggcagcgcggatggccgtctcagcatcgggatc
gaggcgcggttcgaacttgagttctga
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