Rhodophyticola porphyridii: ABWH90_05605
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Entry
ABWH90_05605 CDS
T11241
Symbol
soxR
Name
(GenBank) redox-sensitive transcriptional activator SoxR
KO
K13639
MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR
Organism
rpoh Rhodophyticola porphyridii
Brite
KEGG Orthology (KO) [BR:
rpoh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rpoh03000
]
ABWH90_05605 (soxR)
Transcription factors [BR:
rpoh03000
]
Prokaryotic type
Helix-turn-helix
MerR family
ABWH90_05605 (soxR)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
MerR_1
MerR-DNA-bind
MerR
HipA_C
Imm70
HTH_31
Motif
Other DBs
NCBI-ProteinID:
XHC07708
LinkDB
All DBs
Position
1105950..1106423
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AA seq
157 aa
AA seq
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MSAIAKDLSVGAMAARAGVAVSTLHYYEAEGLISSWRNSANHRRYDRRELRRVAIIRAAQ
SVGVPLSEIRIVLDAVPPNSVVTAADWARAAEPWAARLDAQIETLQRLRKQMASCIGCGC
LSLETCPLYNPRDTLAANGPGARRWTGAPEERSTLEG
NT seq
474 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcgattgcgaaggatctgagtgtgggggccatggcggcacgggcgggggtcgcg
gtttcaacgctccattattacgaggcggaggggctgatcagttcatggcggaacagcgcc
aatcatcgccgctacgaccggcgggagctgcgccgggtggcgatcatccgcgcggcgcaa
tcggtgggcgtaccgctgtctgaaatcaggatcgtgctggacgcggtgccgcccaattcg
gttgtcaccgccgccgactgggcccgcgcggcggagccatgggcggcgcggctggatgcg
cagatcgagaccctgcagcgattgcgcaagcagatggcatcgtgcatcggctgtggctgc
ctgtcgctggagacctgcccgctttacaatccccgggacacgcttgccgccaacgggccg
ggcgcgagacgctggaccggcgcgccggaggagcggagcacactggaaggctga
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