Rhodophyticola porphyridii: ABWH90_06205
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Entry
ABWH90_06205 CDS
T11241
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
rpoh Rhodophyticola porphyridii
Brite
KEGG Orthology (KO) [BR:
rpoh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rpoh03400
]
ABWH90_06205
Enzymes [BR:
rpoh01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
ABWH90_06205
DNA repair and recombination proteins [BR:
rpoh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
ABWH90_06205
Prokaryotic type
ABWH90_06205
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
RMF
Motif
Other DBs
NCBI-ProteinID:
XHC07819
LinkDB
All DBs
Position
1220009..1221433
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AA seq
474 aa
AA seq
DB search
MMSKTPVIYWMRRDFRLADNAALRAACEGGHPVIPVFILDEVVEGHGAAPKWRLGLAVER
FAETLKEAGSRLTLRRGAALEVLRALVDETGAQAVHWNRLYDPDARRRDEAVKSALKDDG
LDAVSHGGHVVFEPWRVETGAGGFYKVYSPFWRAVRGVKVPEPLAAPGKIPAPGTWPATD
SLDDWQMGAAMRRGADVVRPHLLLGEDAARDRLDMFTQERIAEYKAKRDFLDVNATSGLS
EPLSYGEISARTCWHAGWREAETGAKGAEHFVKELIWRDFAYHLVYHTPHITRDNWREGW
DSFPWNEDERLKEVRDWKRGRTGLPVVDAAMREMYVTGRMHNRARMLVASYLTKHLMTHW
RVGQAWFEECLVDWDPASNAMGWQWVAGSGPDAAPYFRIFNPETQAEKFDTEQEYRRKWV
AELSDAPGEEALSYFEAIPENWHMAPDDAYPETPVVGLSEGRARALEAYENRDF
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgatgagcaagacacccgttatctattggatgcgccgggatttccgccttgcggacaat
gccgccttgcgggctgcctgtgaaggcgggcacccggtgatcccggtcttcattctcgac
gaggtggtggagggtcacggcgcggccccgaaatggcggctgggtcttgcggtggagcgc
ttcgcggaaaccctgaaagaggcgggcagccgtctgaccctgcgccgtggcgcggcgctg
gaggtgctgcgcgcgctggtggacgagacgggtgcgcaggcggttcactggaacaggctt
tacgatccggacgcccggcggcgggacgaggcggtgaaatccgcgctgaaggatgacggg
ctggacgccgtcagccatggcgggcatgtcgtgttcgaaccctggcgggtcgagaccggg
gcgggcggcttctacaaggtctattcgcccttctggcgggcggtgcgtggagtaaaggtg
cccgaaccgctggccgcgcccggcaagatccccgcgcccgggacatggcccgcgacggac
agccttgacgactggcagatgggggccgcgatgcggcgcggcgcggatgtagtgcgcccg
cacctgttgcttggggaggacgcggcccgggaccggctggacatgttcacgcaggagcgg
atcgcggagtacaaggccaaacgggattttctggacgtgaacgccacctccggcctgagc
gagccgctgagctatggcgagatcagcgcccggacctgctggcacgccgggtggcgggag
gcggagaccggcgccaagggcgccgagcatttcgtcaaggaactgatctggcgcgatttc
gcctatcatctggtctaccacacgccgcatatcacccgcgacaactggcgcgagggctgg
gacagcttcccgtggaacgaggatgagcgcctgaaagaggtgcgcgactggaagcgcggg
cgcaccgggctgccggtggtcgatgcggcgatgcgcgagatgtatgtgacgggccggatg
cacaaccgggcgcggatgcttgtggcctcctatctcaccaagcatctgatgacccattgg
cgcgtcggtcaggcgtggttcgaggagtgccttgtggactgggatccggcctccaacgcg
atgggctggcaatgggtcgccggatcggggcccgacgcggccccctatttccgcatcttc
aaccccgagacccaggccgagaagttcgacacggagcaggaatatcgccgcaaatgggtg
gccgagctctccgatgcgccgggggaggaggcattgtcctatttcgaagcgatcccggaa
aactggcatatggcgcccgacgacgcctatccggagacaccggtggtggggctgtcggag
gggcgggcgcgggcgctggaggcttatgaaaatcgcgatttctga
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