Rhodophyticola porphyridii: ABWH90_06680
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Entry
ABWH90_06680 CDS
T11241
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
rpoh Rhodophyticola porphyridii
Pathway
rpoh02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rpoh00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
ABWH90_06680
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rpoh02000
]
ABWH90_06680
Transporters [BR:
rpoh02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
ABWH90_06680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
XHC07908
LinkDB
All DBs
Position
1316576..1318123
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AA seq
515 aa
AA seq
DB search
MRYKGTLLATALTIGLPAVASAQPDENTLVVGLSADASTFEPAEIRSMDNSNIARHIFTA
LTSISDDGEILPRLATGWTMSEDGTRLEFTLPEGRVCEDGEPLTAEDVAYSWNRAGDPEN
AFAGNTPGFVYTSMQFAGAEVVDDLTVAINTVSDTGMALGFTSQVFIHCKDSYENMSEDE
IARSPVSSGEYRLVDWNIGSNLTLEKWQGEGNFDRIEFRIIPEASTRVAELLTGNVDIIT
NVSPDQMDVVNASGVADVQVVQGLRRMYIGFNQSDQFEGVAGEAVRDENVRRALQYAVNV
PAICSQLLNFECERATGLVNPPNDNPNLEPYPYDPATAERLLDEAGYPRGDDGVRFEITL
QAPRGRYLNDANVALAVGSFLTEVGVQTEVELLEWSSVYVPLIRGHDAGPLFFLGSGGAL
WSALYDMAVLATVESGPNYTDWADPRWFDRWEDIANAATPEEEREVINEMLQVFYDYGPW
LHMYFQPDFYGVSRRIEWQARRDEHVNLWDARLAE
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgagatacaagggaacgcttcttgccaccgcgctgacgatcggcctgccagccgttgcg
tcagcccaaccggacgaaaacacgcttgtggtcgggctcagcgccgatgcaagcaccttc
gagccggccgagatccgctcgatggacaattccaacatcgcgcgacacatctttaccgcc
ctgaccagcatcagcgatgacggggagatcctgccgcgtcttgccaccggctggaccatg
agcgaggatggcacccggctggaattcacattgcccgaaggccgcgtttgcgaagacggc
gaaccgctgacggcggaggacgtggcctattcctggaacagggcgggggacccggagaac
gccttcgcgggcaacacgcccggcttcgtctatacctcgatgcagttcgcgggcgccgag
gtggtggatgacctgaccgtcgccatcaacaccgtctccgataccggcatggcgcttggc
ttcacctcgcaggttttcatccactgcaaggacagctacgaaaacatgagcgaggacgaa
atcgcccgttcgcccgtgtcgtccggcgaataccggctggtggattggaacatcgggtcg
aacctgacgctggagaaatggcagggcgagggcaatttcgaccggatcgagttccggatc
attcccgaagcctcgacccgggttgccgaacttctgaccggcaatgtggatatcatcacc
aatgtgtcgcccgaccagatggacgtggtcaacgccagcggcgtggccgatgttcaggtc
gtgcagggactgcggcggatgtatatcggcttcaaccagtccgaccagttcgagggtgtc
gccggggaggcggtgcgtgacgagaatgtgcgccgtgcgctgcaatatgcggtcaatgtg
ccggcgatctgctcgcaactcctgaacttcgagtgtgagcgggcgaccgggttggtgaac
ccgcccaacgacaaccccaatctggagccctatccctacgatccggcaaccgccgagcgc
ctgctggacgaggccggatacccccgtggcgatgacggggtgcgcttcgagatcacgttg
caggcaccgcgcgggcgctatctgaacgatgccaatgtggcgcttgcggtcggcagtttc
ctgaccgaggttggcgttcagaccgaggtggagcttcttgaatggtcgtcggtttatgtg
ccgctgatccgtggccacgatgcgggcccgctcttcttcctcggctcgggtggcgcgctt
tggagcgcgctttacgacatggccgtgctggccactgtggaaagcggcccgaactatacc
gactgggccgatccgcgctggttcgaccgttgggaagacatcgccaatgccgcaacgccg
gaggaggagcgcgaggtcatcaatgagatgcttcaggtcttctatgactatggcccgtgg
ttgcacatgtatttccagccggatttctacggggtgagccgccggatcgaatggcaggcc
cggcgcgatgaacacgtcaatctctgggatgcccgcctggcggagtga
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