Rhodophyticola porphyridii: ABWH90_08245
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Entry
ABWH90_08245 CDS
T11241
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rpoh Rhodophyticola porphyridii
Pathway
rpoh03420
Nucleotide excision repair
rpoh03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rpoh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ABWH90_08245
03430 Mismatch repair
ABWH90_08245
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rpoh03400
]
ABWH90_08245
Enzymes [BR:
rpoh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ABWH90_08245
DNA repair and recombination proteins [BR:
rpoh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ABWH90_08245
MMR (mismatch excision repair)
Other MMR factors
ABWH90_08245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
XHC08209
LinkDB
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Position
1653711..1655597
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AA seq
628 aa
AA seq
DB search
MTSRIGKPNTATDTALHERLAGDGSRHFVMVAGAGSGKTTSLVKALAQIERTQGASLRRN
GQRVACITYTEVAVEEIRSDVGNDELFHVSTIYSFIWNVIKPFQKNLREWVKGRLQEKIA
EKQEKIDKPGTREATRARAAEDIERYHGQLAEIDGVKSFRYGTGSDYTNGVLGHSDILRI
GPAFIQNHALMRSVLTRRFPVIFIDESQDTDPAFVEALRQVARETPQGFCLGFFGDPVQK
IYMQGAGPIETEDGWETLEKPENFRCPQTVLRVINRIRAEDDGLKQTRGRREIVDGEEVA
VEGTARVLILPADDQRQERLENARQWLADQDNDDGWLKSDDESALRLLVLVHRMAAVRLG
FPNLYSALNDKSSEDLSSGLIDGTAWVVRPFLSYIMPIALARQEGREFEIMRLLRKHCPR
FQPEAVAAADTAGFLNALQGEIAELVAMLNSSSGARVGDVVSFLQANNLVVVDERYAALI
KNFAQTEERVTDPSPENAALRFMQCDASELWGYRKYIEKLSPFSTQQGIKGAEFDKVLVV
VDDHEGRSNAFAYGKYFGVTPLSNTDQGHINAGRDSVIGRTRRLFYVCCSRALSDLAVVI
FAEDTADMREAIMAKAFFEPEWIHVLDQ
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atgacaagtcgtatcggaaagcctaatacagcgaccgacacggctcttcacgagcggctc
gccggcgacggcagccgccactttgtcatggtggccggcgccggttcgggaaagaccaca
tcgctcgtaaaggcactggctcagatcgaacggactcagggtgcatcgctgcgccgaaac
gggcaacgggttgcctgcatcacctacacggaagtggctgtcgaagaaattcgcagtgat
gtcggcaatgatgaactcttccacgtctcgacgatttacagctttatctggaatgttatc
aagccgttccagaaaaatctccgcgaatgggtgaaaggcaggctgcaagagaagattgcc
gaaaagcaggaaaaaatagataagcctggaacacgagaagcaacaagggcgcgcgctgct
gaagatatcgagcgatatcacggtcagcttgccgagatcgatggtgtcaagagttttcgc
tatggcactggtagcgattacaccaatggcgtgctcggtcacagcgacattctgaggatt
ggccccgcgtttattcagaaccatgctttgatgcgtagtgtcctgacgcggcgctttccc
gtcattttcatcgatgagagccaggatacggaccccgcctttgtcgaggcgctgcgccaa
gtagcgagagaaacaccccaagggttctgcctcggtttcttcggtgatccggtccagaaa
atttacatgcagggtgccggtccaatcgagaccgaggatggatgggaaacgctggaaaag
cctgagaatttcaggtgcccgcagactgtgttgcgcgttataaaccggataagggccgaa
gatgacgggctgaagcagacacgcggacgccgcgaaatcgtcgacggtgaagaggtggcg
gtagagggcacggcacgggtgttgatcttgcccgccgatgaccagcgacaggaacggctc
gaaaatgcgcgtcagtggcttgctgatcaggacaatgatgacggctggttgaaaagcgac
gatgaaagcgcgctacggctgctggtgctggtccaccggatggcggcggtccgcctcggg
tttccaaatctatacagcgcgctcaacgacaaatcatcggaagacctgagctcaggactg
atcgacggcaccgcctgggtcgtgcggccatttctctcgtacattatgcccatcgcgctt
gcgcgtcaggaagggcgcgagttcgagatcatgcgcctgcttcgaaagcactgtccgcgg
ttccagcctgaagctgtggccgctgcggatacggcagggttcttgaatgcgctccagggc
gaaatcgccgagctagtggcaatgcttaattccagcagcggtgctcgtgtcggcgatgtc
gtaagttttttgcaagccaacaatttagttgtggtcgacgagcgatatgccgctctcatc
aagaacttcgcccaaaccgaagaacgggtaaccgatccgtcacccgagaacgcagcgcta
cgtttcatgcaatgcgatgcgtccgagttgtggggctaccgaaaatatatcgagaagctt
tcccctttttctacacaacagggtattaagggcgcggagttcgacaaagttctcgttgtg
gtcgacgatcatgaaggccgatcgaacgcattcgcctacggcaaatacttcggtgtgacg
ccgctctccaacacggatcagggtcacatcaatgccggccgcgattctgtgatcggtcga
acgcggcgcttgttttatgtctgctgctcgcgggcgttatccgacctcgccgtcgtgata
tttgccgaagataccgcagatatgcgtgaagcaatcatggccaaggcattcttcgaacct
gagtggattcacgtgctcgatcaataa
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