Rhodophyticola porphyridii: ABWH90_11335
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Entry
ABWH90_11335 CDS
T11241
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
rpoh Rhodophyticola porphyridii
Pathway
rpoh02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rpoh00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
ABWH90_11335
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rpoh02000
]
ABWH90_11335
Transporters [BR:
rpoh02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
ABWH90_11335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
YqhI
Motif
Other DBs
NCBI-ProteinID:
XHC05173
LinkDB
All DBs
Position
2277827..2279461
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AA seq
544 aa
AA seq
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MRKTAQTVHPAAVAYAREVADGTMDRREFLTRATALGVTIPAAYALIGSARPARADAHVR
QGGTIRIQQDVRAMKDPPTFDWPQIANIGRGWLEYLVEYSRDGVFSGRLLESWDVNEDAT
RYTLNLRQGVTWNDGTPFTAEDVAYNVTRWCNRDMEGNSMSSRMGALINEETGLIADGVI
EIADEHTVILNLAFPDITIIPTMSDYPSAIVQNGFSGNPLDNPVGTGPYLPVSYEVGVGA
VLEKNPDHTWWDAENGAALDRIEFIDLGTEQSAHLAAAEAGEIDMLYETVGNFVDVFDTI
GWTRSEALSANSLVLRTNQTNAPYDDVRVRRALALACDNNVLLALGYDGRGTVAENHHVC
PIHPEYADIGPPEYNPEEARRLMEEAGQLDFEHELISIDDSWRRPTTDALAAQLRDAGFT
VNRTIYPGNTFWNDWAEYPFSSTDWGHRPLGVQNLTLAYKSGEPWNETGFDNAEFDQLLA
EASAIADADARSQVMARIQQILRDEGVIIQPYWRSVYRHYREGVVGGDTHPIYEIHLHYL
GLAA
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaaaccgcacagaccgtgcatcctgccgccgtggcctacgcccgggaagtcgcc
gacggaacgatggaccggcgcgagttcctgacccgcgccaccgcgcttggggtcaccatc
cccgccgcctacgccctgatcggatcggcgcgcccggcccgcgccgacgcgcatgtccgc
cagggcggcacgatccgcatccagcaggacgtgcgcgccatgaaggatccacccaccttc
gactggccgcagatcgcgaatatcggccgcggctggcttgaatatctcgttgaatatagc
cgtgacggcgtgttctctgggcggcttctggaaagctgggacgtgaacgaggacgcaacc
cgctacacgctgaacctgcgccagggcgtcacctggaatgacggcacgcccttcaccgcc
gaggacgtggcctacaacgtcacccgctggtgcaaccgcgatatggaaggcaactcgatg
tcgtcgcgcatgggcgccctgatcaacgaggagaccggcctgatcgccgatggcgtgatc
gagatcgcggatgaacataccgtgatcctgaacctcgccttccccgacatcacgatcatc
ccgaccatgtccgactacccgtcggccatcgtgcagaacgggttttccggcaatccgctc
gacaacccggtcggcaccggcccctatctgccggtttcctacgaggtcggcgtcggggca
gttctggaaaagaaccccgatcacacatggtgggacgcggaaaacggcgccgcgctcgac
aggatcgagttcatcgaccttggtaccgagcaatccgcacatctggccgccgccgaggcc
ggcgagatcgacatgctctacgagaccgtgggcaacttcgtcgatgtattcgataccatc
ggctggaccagatccgaggcgctttcggccaactcgctggttttgcggacaaaccagacc
aacgcgccctatgacgatgtgcgcgtgcggcgcgcccttgcgctggcttgcgacaacaac
gtgctgctggcgcttgggtatgacggtcgcggcacggtcgccgaaaatcaccatgtctgt
ccgatccacccggaatatgccgatatcggcccgccggaatacaaccccgaggaagcccgc
cgcctgatggaggaagccgggcaactggatttcgagcatgaactgatctccatcgacgac
agctggcggcggcccaccaccgacgcgctggccgcgcagcttcgggatgcgggctttacc
gtcaaccggacgatctatcccggcaacacgttctggaacgattgggccgaatacccgttc
agttccaccgactggggccaccggcccctgggtgtccagaacctgacgctggcctacaag
tcaggcgagccgtggaacgagaccgggttcgacaatgcggagttcgaccagcttctggcc
gaggcctcggccattgccgatgcggatgcccgcagccaggtgatggcccgcatccagcag
atcctgcgcgacgaaggcgtgatcatccagccatactggcgctcggtctaccgccactac
cgcgaaggggtggtgggcggcgacacccacccgatctacgagatacatctgcattatctg
ggcctcgcggcctga
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