Rhodophyticola porphyridii: ABWH90_12285
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Entry
ABWH90_12285 CDS
T11241
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
rpoh Rhodophyticola porphyridii
Brite
KEGG Orthology (KO) [BR:
rpoh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rpoh03009
]
ABWH90_12285 (rimO)
Enzymes [BR:
rpoh01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
ABWH90_12285 (rimO)
Ribosome biogenesis [BR:
rpoh03009
]
Prokaryotic type
ribosomal protein modification factors
ABWH90_12285 (rimO)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
CLP1_P
Thioredoxin_6
Motif
Other DBs
NCBI-ProteinID:
XHC05345
LinkDB
All DBs
Position
2465806..2467188
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AA seq
460 aa
AA seq
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MTQNPPDLRPDLAHARVPRAADAARPGQPTIGMVSLGCPKALVDSERILTRLRAEGYAIS
PDYAGAEAVIVNTCGFLDSAKAESLDAIGEALRENGRVIVTGCLGAEPDYITGAHPKVLA
VTGPHQYEQVLDAVHTAVPPAPDPFVDLLPATGVSLTPRHYSYLKISEGCNHKCKFCIIP
DMRGKLASRPAHAVIREAEKLVEAGVRELLVISQDTSAYGVDIRHREDRGHRAHITDLAR
DLGALGAWVRLHYVYPYPHVRDLIPIMADPASGLLPYLDIPFQHAHPDVLRRMARPAAAA
RTLDEIAAWRATCPEITLRSTFIVGYPGETEAEFQTLLDWLDEAQLDRVGCFRYENVEGA
RSNALPDHVAEEVKDERFARFMEKAQAISAAKLEARIGQRIDVIVDAVDDEGATCRTKAD
APEIDGNLFIDAGFETLEPGQIVTVEVDEASEYDLWGRPV
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgacccagaacccgcccgatcttcgccccgatctcgcccatgcccgcgttccgcgcgcg
gcggatgcggcccggcccggccagcccaccatcgggatggtctcccttggctgccccaag
gcgctggtcgacagcgaacggattctgacccgcctgcgcgcagagggctatgcgatctct
ccggattacgcgggcgcggaggcggtgatcgtgaacacctgcggatttctcgacagtgcc
aaggccgaaagcctcgacgccatcggcgaggcgctgcgcgaaaacgggcgggtgatcgta
acggggtgtctgggggcggaacccgattacatcaccggcgcgcatcccaaggttctggcc
gtcaccggcccgcaccagtacgaacaggtgctggacgcggtacataccgcggtgcccccc
gcgcccgatccgttcgtcgatctgctgcccgcgacgggcgtgtcgctgaccccccggcat
tacagctatctgaagatctccgagggctgcaaccataagtgcaagttctgcatcatcccg
gacatgcgcggcaaactggcctcccgccctgcgcatgcggtgatccgcgaggcggaaaag
ctggtcgaggccggtgtgcgggaacttctggtgatctctcaggacacatccgcctacggg
gtcgatatccgccatcgcgaagatcgcgggcaccgggcccatatcaccgatctggcccgc
gatctgggcgcgctcggggcctgggtccggctgcattacgtctatccctacccccatgtg
cgcgacctgatcccgatcatggcggatccggccagcgggcttttgccctatctcgacatt
ccgtttcagcatgcccacccggatgtgctgcgccgcatggcccggcccgccgccgccgcg
cgcacgcttgacgagattgccgcgtggcgcgccacctgccccgagatcacgctgcgcagc
accttcatcgtcggctatcccggcgagaccgaagcggagtttcagacgctgctggactgg
ctggacgaggcacagctcgaccgggtcggatgtttcagatacgaaaatgtcgagggcgcg
cgctccaacgcattgccggatcacgtcgccgaagaggtcaaggacgagcgcttcgcccgg
ttcatggaaaaggcgcaggcgatttccgccgccaagcttgaggccagaatcggccagcgg
attgatgtcatcgtcgatgcggtggatgacgagggcgcgacctgccgaacaaaggcggac
gcgccggaaatcgacggcaacctgttcatagatgccgggttcgagacgctggagcccggc
cagatcgtgaccgtcgaggtggatgaagccagcgaatacgacctttggggccggccggtc
tga
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