Rhodophyticola porphyridii: ABWH90_12470
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Entry
ABWH90_12470 CDS
T11241
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
rpoh Rhodophyticola porphyridii
Pathway
rpoh02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rpoh00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
ABWH90_12470
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rpoh02000
]
ABWH90_12470
Transporters [BR:
rpoh02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
ABWH90_12470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
XHC05381
LinkDB
All DBs
Position
2499642..2501114
Genome browser
AA seq
490 aa
AA seq
DB search
MFHRFKMTGAILALTASGALAQQTDITIGMQLEPPNLDPTGGAAAAIDEVVYANVFEGLT
RFASDGSVVPGLAETWEISEDGLTYTFSLRDGVMFHDGSSFTAEDVVFSLDRARAEDTTN
AQAALFAGIESVEAVDDTTVVLRLSAPNGALLFNLAWGDAVIVAPESAETNATNPVGTGP
FVFADWVQGDRVELTRNPDYWGEAPALEAATFRFISDPNAAFAALMAGDVDAFPVFPAPE
TLGQFEADPRFSVIVGSTEGETILAMNNQSAPLDDIRVRQAISHAINRQDIIDGAMFGYG
TPIGTHFAPHHPDYVDLTGQSAFDPETARALLAEAGVSDLTLRLALPPPSYARRGGEIIA
AQLREVGIETEISNLEWAQWLEQVFRGKDFDLTIVSHTEPMDIGIYARPEYYFQYDNPGF
QDLMNTLTLTADPAERSALLRSAQEVIADDYVNGYLFQLAKTGVANANIEGLWENSPTQA
NNLSGVRWTQ
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgttccaccgtttcaagatgaccggcgcaatccttgcccttacggcaagcggcgcgttg
gcgcagcagaccgacatcaccatcgggatgcagctggaaccgcccaacctggacccgacg
ggcggcgccgccgccgccatcgacgaggtggtttacgccaatgtcttcgaggggctgacg
cgctttgcctccgatgggtcggtggtgccggggctggccgagacatgggagatttccgaa
gacgggctgacctatacgttttcgctgcgtgacggggtgatgttccatgacggcagcagc
ttcaccgccgaggatgtcgtcttctccctcgatcgcgcccgggccgaggacaccacgaat
gcgcaggccgcgctgttcgcggggatcgagagcgtcgaggcggttgacgacaccaccgtg
gtgctgcgtctgagcgcgccgaacggggcgctgctgttcaacctggcctggggcgatgcg
gtgatcgtcgcccccgaaagtgccgagacgaatgccaccaatccggtcggcaccggcccc
ttcgtctttgccgactgggtgcagggcgaccgggtggagctgacccgcaaccccgattac
tggggcgaggcgccggcgctggaggccgcgaccttccgcttcatttccgacccgaacgcc
gcctttgccgcgctgatggccggggatgtggatgccttcccggtctttcccgcgcccgaa
acgcttggccagttcgaagccgatccccggttctccgtcatcgtcggctcgaccgagggg
gaaaccattctggcgatgaacaaccagtccgcgccgctggacgatatccgcgtgcgtcag
gcgatttcccatgcgatcaaccggcaggacatcatcgacggtgcgatgttcggctatggc
acgcccatcggcacccatttcgccccgcatcacccggattacgtcgatctgaccgggcaa
tccgccttcgaccccgagaccgcccgcgcgctgctggcggaggccggtgtctccgatctg
acccttcgtctggcgctgccgcccccatcctatgcgcgccggggcggggagatcatcgcg
gcccagcttcgcgaggtggggatcgagaccgagatcagcaatctggaatgggcgcaatgg
ctggaacaggtgttccggggcaaggatttcgatctgaccatcgtcagccataccgaaccc
atggatatcgggatctatgcccggccggaatactacttccagtatgacaatccggggttt
caggatctgatgaacacgctgacgctgaccgccgatccggcggaacgctcggcgctgctg
cgctcggctcaggaggtgatcgccgacgattacgtcaacggctatctgttccagcttgcg
aaaaccggcgtggccaacgccaatatcgaaggtctgtgggaaaactccccgacacaggcc
aataatctgagcggcgtccgctggacgcagtag
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