Rhodophyticola porphyridii: ABWH90_13930
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Entry
ABWH90_13930 CDS
T11241
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
rpoh Rhodophyticola porphyridii
Pathway
rpoh00550
Peptidoglycan biosynthesis
rpoh01100
Metabolic pathways
rpoh01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
rpoh00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
ABWH90_13930 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
ABWH90_13930 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rpoh01011
]
ABWH90_13930 (mrdA)
Enzymes [BR:
rpoh01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
ABWH90_13930 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
rpoh01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
ABWH90_13930 (mrdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
XHC05653
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Position
2779883..2781835
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AA seq
650 aa
AA seq
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MKRTPKETEDSARLIGRRSLIVAGVMAGTGAVLAGRMRYLQLERADDFRLLAEENRINIR
LLPPARGLIFDRAGTLLAGNEQNYRITMVREDADDIDEVLRRLSELVNLDMGRLSRAREE
MLARAPFVPVTIADRLSWEELSTVAVNAPALPGVTPEFGLSRIYPLGADFAHVVGYVGPV
SDWYLETTGDTDPVLQIPDFQVGRYNIEARMENSLRGRAGTKRVEVNAGGRVMRELDRDA
ATPGSDLQLTIDAGLQNYVEARMIGESAGAVVMEVQTGDVLALASAPTFDPNLFVRGIST
TDWNTLNQDRYRPLANKAVQGLYPPGSTYKMIVAMAALEAGVITPEETVYCGGFTELGNR
RFHCWRRGGHGHMNMIDSITQSCDVYYYELAQRTGIEAISAMARRFGCGVRHDVPLSGVV
EGLAPTMQWKRENRGEDWLVGDTLNASIGQGFVLSSPLQLAVMTARLATGRMISPRMVKS
IDGREAGALHGEDMGLHPNHLALIQEGMYRVNNHRRGTAYRSRTEDATYTIAGKTGTSQV
RNITAAERRAGVISNADLPWERRDHALYVGYAPYDNPRYAVSVVVEHGGGGSTAAAPIAR
DILLRAQHGDVPPPELYPADQRREIEDLHERLPLRPAPPVDGPTGGSSQA
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgcacccccaaggaaaccgaagacagcgcccgcctgatcggacgtcgcagtctt
atcgtggcgggtgtgatggcgggcaccggcgcggttctggcaggccggatgcgctatctg
caactggaacgggcggatgatttccgcctgctggccgaagagaaccggatcaatatccgc
ctgcttcccccggcacgcggcctgatcttcgaccgggccggcacgctgcttgccggcaat
gaacagaattaccggatcacgatggtccgcgaagatgccgatgacatcgacgaggtgctc
agacggctcagcgaactggtcaatcttgacatgggccgcctttcccgcgcgcgggaggag
atgctggcccgtgcgcccttcgtcccggtcaccattgccgaccggctgagctgggaggag
ttgtccaccgtcgcggtcaatgcccccgccctgcccggtgtgacgccggaattcggcctc
agccggatctatccgctcggcgccgattttgcccatgtggtcgggtatgtcggccccgtc
tcggactggtatctggaaaccaccggggataccgacccggtcctgcagatcccggatttt
caggtcggtcgctacaatatcgaagcccggatggaaaacagcctgcgcggccgtgcgggt
accaagcgggtcgaggtcaatgccggcggccgggtcatgcgcgagctggaccgcgatgcc
gccacgcccggatcggatctgcaactgaccatcgacgcgggcctgcagaattacgtggag
gcgcgcatgatcggcgaaagcgccggcgccgtggtgatggaggtgcagacgggcgatgtg
ctggcgctcgcctccgccccgaccttcgatcccaacctctttgtccgcggcatctccacc
accgactggaacacgctgaaccaggaccgctatcgcccactggccaacaaggcggtgcaa
gggctgtatccgcccggctccacctacaagatgatcgtcgccatggccgcacttgaggcg
ggcgtcatcacaccggaggaaaccgtctactgcggcggcttcaccgagcttggcaaccgg
cgtttccattgctggcggcggggcgggcatggccatatgaacatgatcgacagcatcacc
cagtcctgcgatgtctattactacgagcttgcgcaacgcaccgggatcgaggcgatttcc
gccatggctcggcgctttggctgcggggtgcgccacgatgtgccgctgtccggcgtggtg
gaaggtcttgcccccacgatgcaatggaagcgcgagaaccggggcgaggactggcttgtg
ggcgatacgctgaacgcctccatcggtcaggggttcgtgttgagctcgccgctgcaactg
gcggtgatgactgcaaggctggccacgggccggatgatttctccgcgtatggtgaaatcc
atcgacgggcgggaggcgggggcgcttcatggcgaggatatgggcctgcaccccaaccat
ctcgcgctgatccaggaaggcatgtaccgcgtcaacaaccaccgccgcggcaccgcctat
cgcagccggacggaagacgcgacctataccatcgcgggcaaaaccggcaccagccaggtt
cgcaacatcaccgccgcggaacggcgcgccggcgtgatcagcaacgccgatctgccatgg
gaacggcgcgatcatgcgctttacgtcggatatgcgccctatgacaatccgcgctacgcc
gtctcggtcgtggtcgaacatggcggcggcgggtcgacggcggcggcgccgatcgcacgc
gacattctcctgcgcgcccaacatggcgatgtgcccccgcccgagctttatcccgccgat
cagcgccgcgagatcgaagacctgcacgaacgcctgccgcttcgccccgctcccccggtc
gacggtccgacgggcgggagcagtcaggcatga
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