Rhodophyticola porphyridii: ABWH90_15535
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Entry
ABWH90_15535 CDS
T11241
Name
(GenBank) TRAP transporter substrate-binding protein
KO
K11688
TRAP-type transport system periplasmic protein
Organism
rpoh Rhodophyticola porphyridii
Pathway
rpoh02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
rpoh00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
ABWH90_15535
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rpoh02000
]
ABWH90_15535
Transporters [BR:
rpoh02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
ABWH90_15535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DctP
Motif
Other DBs
NCBI-ProteinID:
XHC05949
LinkDB
All DBs
Position
3100619..3101671
Genome browser
AA seq
350 aa
AA seq
DB search
MSFVKSLALAATTLVAATALSAQEVTLRFQHFVSPLSANPTGFMQPWADAIEAQSDGRIR
VELYPFMQLGGAAQSQYDLIRDGAIDGGWVIPGYQPGRFPEAEALELPFMTPKSAEEASR
AAWTYTQQHLMDDFADVHVIAAHMHGPGLVHLRGPAIDEVADFDGLSLRGPSRPATLLLE
ELGATPVGMPVPAFPEALARGVVDGGVITWEMAPSLRLDELTRSHTDVAGDRSLYNLYFI
WAMNRDVYEALPEDLRAVIDANSGMMASAWAGRAHDEGDLRGRDAMAAAGNEIAEMSEEV
TAEIRAMGNRVIAAWIAEADEKGLDGAALVQSAREAMAAEIGTAAGRINR
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgtctttcgttaagtccctggcacttgccgcaaccacccttgtcgcggccaccgcgctg
tccgcccaggaggtcacgctgagatttcagcatttcgtttcgccgctatcggccaatccc
accggcttcatgcagccatgggccgacgcgatcgaggcgcagtccgatggccgtatccgg
gtggagctttaccccttcatgcagcttgggggtgccgcccaaagccagtatgatctgatc
cgcgacggcgcgatcgacggcggctgggtgatccccggatatcagcccggccgcttcccc
gaggcggaagccctggaattgccgttcatgacgccgaaatccgccgaagaggcaagccgc
gcggcctggacatacacgcagcagcatctgatggatgatttcgccgatgtgcatgtgatc
gccgcgcatatgcacggcccgggccttgtgcatctgcgcggacccgcgattgacgaggtt
gcggatttcgacggcctgtcgctgcgcggcccgtcccgcccggcaaccctgctgctggag
gaactaggcgcgaccccggttggaatgcccgttcccgcctttccggaggcgctggcgcgc
ggcgtggtcgatggcggcgtgatcacatgggagatggcgccgtccctgcggctggatgaa
ctgacccggagccacacggatgtcgccggcgaccggtcgctctacaacctctacttcatc
tgggcgatgaaccgggatgtctacgaggcgctgcccgaggatctgcgcgcggtgatcgac
gcgaattccgggatgatggccagcgcatgggcgggccgcgcccatgacgaaggcgatctg
cgcgggcgcgacgcgatggccgccgcgggcaacgagatcgccgagatgtccgaagaggtc
accgccgaaatccgcgcgatgggcaaccgcgtgatcgccgcctggatcgcggaggccgat
gagaaaggtctcgatggcgcggcgctggtgcaatcggcgcgcgaggcgatggccgcggag
atcggcaccgcggcgggccggatcaaccggtag
DBGET
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