Rhodophyticola porphyridii: ABWH90_17620
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Entry
ABWH90_17620 CDS
T11241
Name
(GenBank) class I SAM-dependent RNA methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
rpoh Rhodophyticola porphyridii
Brite
KEGG Orthology (KO) [BR:
rpoh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rpoh03009
]
ABWH90_17620
Enzymes [BR:
rpoh01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
ABWH90_17620
Ribosome biogenesis [BR:
rpoh03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
ABWH90_17620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Cons_hypoth95
TRM5-TYW2_MTfase
MTS
Motif
Other DBs
NCBI-ProteinID:
XHC06337
LinkDB
All DBs
Position
3530684..3531922
Genome browser
AA seq
412 aa
AA seq
DB search
MLEIERLGHHGDGIAPGPVYVPLTLPGEIVDGTVLNGRVEDARIVTPSAERVRAPCPHFR
SCGGCSLQHASDRFLAEWKEDVVRRALAAQGLEAGFRPVHVSPARSRRRATLAGTRTKKA
AMVGFHARKLDTIVPIRDCFVLHPDLMAMIPALEEITRLGGSRSATLAFALTRSEAGIDC
AVTGGKPLDETLRMALPRYIGRFARLTWGEETVFTSALPVQEFGPAKVTPPPGAFLQATG
DGEAALLAAVREATGSATHIADLFAGCGTFALPLAVAARVHAVEGDGEMIAALDRGLRLA
TGLKPLTTETRDLFRRPLLADELARFDAVLIDPPRAGAEAQTREIAKAQVPRVAMVSCNP
VTFARDAKTLTEAGYRLNWVQVVDQFRWSPHVELAASLTLPHIEAKPKKGQG
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgcttgagatcgaacggcttggccaccacggcgacggcatcgcgccggggcccgtctat
gtgcccctgaccctccccggagagatcgtggacggaaccgttctgaacggcagagtcgag
gatgcgcgtatcgtgacgccctcggcagagcgggttcgtgcgccttgcccgcattttcgg
agttgcggcggctgctccttgcaacatgcgtccgaccggtttctggccgaatggaaggag
gatgtcgtgcgcagggcgctggcggcacagggtctggaggccggttttcggccagttcac
gtgtcccccgcgcgatcccgccgtcgcgcgacccttgcaggaacgcgcaccaaaaaggca
gcaatggtcgggtttcacgcgcgaaaattagacacgatcgtgccgatcagagactgtttc
gtactgcacccggatctgatggcgatgatcccggcattggaggagataacccggctgggc
ggatcgcgcagcgccacgttggccttcgccctgacccgatcggaagcggggatcgattgc
gccgtcactggcggcaagccgctggatgagaccctgcggatggcgctgccgagatacatc
gggcggtttgcgcgccttacatggggcgaggaaaccgttttcaccagcgccctgccggta
caggaattcggcccggccaaggtgacaccaccgcccggggccttcctgcaggccaccggg
gacggggaagcggcgctgctggccgcggtcagggaggccaccggatcagcgacgcacatc
gccgatcttttcgcgggatgcggcacctttgcgctgccgcttgcggttgcagcgcgcgtt
catgcggtcgagggggatggcgagatgatcgcggcgctggaccgtggactgcgcctggcg
accgggctcaagccgctgacaaccgaaacgcgggatctcttccgccgtccgcttcttgcc
gatgaactggcgcgatttgatgccgtcctgatcgacccgccgcgcgcgggtgccgaggcg
cagacccgcgagatcgccaaggcgcaggtgccgcgcgtggcaatggtttcctgcaacccg
gtcacctttgcccgcgatgccaaaaccctcaccgaggcaggctatcgcctgaattgggtg
caagtcgtcgatcagtttcggtggagccctcatgtggagcttgctgcgagcctgaccctg
ccccatatcgaggcgaagccgaagaaggggcagggatga
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