Rhodophyticola porphyridii: ABWH90_17680
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Entry
ABWH90_17680 CDS
T11241
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
rpoh Rhodophyticola porphyridii
Pathway
rpoh02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rpoh00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
ABWH90_17680
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rpoh02000
]
ABWH90_17680
Transporters [BR:
rpoh02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
ABWH90_17680
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
XHC06349
LinkDB
All DBs
Position
complement(3541955..3543520)
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AA seq
521 aa
AA seq
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MTKQFPTKLKGLLATAALALVLPGIAAAQDQTLTVGLTADAVHLDPQAGEELSSNIMFYH
LYDPLVRRDANLQFGPGLAESWELVDDVTWRFTLREGVTFHNGEPFTADDVIFTFDRLKD
SLMSNLAKNIDTYTAVDERTIEIVTYQPYAALPDDLAAILILNRDHAEAVGEDQMELQPV
GTGPYRLNEWIREDRIVLDAFQEYYAGPAEIDQVVFRPLTNPATRTAALLTGELDIVQDL
SVRDVERVAAEDGFEVVTRPSLLNLVLALDVRPQSPTIDLDTNPMTDRRVREAIARAIDV
ETIRTVIMNGLSTPSEQYVPSTHVGYLEGANFREMYPFDLEAARALMAEAGYADGFTMTL
DATNNRYVNDAQIAQALASMLSQIGITLELNLMPRANFFGYIRVPSEQSSFIMSGWDVPS
GDAGSMYASMFYSPGTREGYSQVNRGHYSNPEVDRLIDLADSTPRIDERDAHLQQVTEIL
LQDIPMIPVHYEQDIYGVRDGIEFEPRTDKFLWAYDIRITE
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgacgaaacaattccccaccaagttgaaagggctgctggcaacggccgcgcttgctctg
gttctgcccggcatcgccgcggcgcaggatcagaccctgaccgtcggtctgaccgccgac
gccgtacatcttgacccgcaggccggcgaagagctgtccagcaacatcatgttctaccac
ctttacgacccgctggtgcgccgcgacgcgaacctgcaattcgggccgggtttggcggaa
agctgggaactggtggatgacgtcacctggcgcttcaccctgcgcgaaggcgtgaccttc
cataacggggaaccgttcaccgccgacgacgtgattttcacattcgaccggctgaaagac
tcgctgatgtcgaacctggccaagaacatcgacacctataccgccgttgatgagcggacg
atcgagatcgtcacctatcagccctatgccgccctgccggacgatctggccgcgatcctg
atcctgaacagggatcacgccgaggccgtgggcgaagaccagatggagctgcaaccggtc
ggcacgggcccctatcggttgaatgaatggatccgcgaagaccggatcgttctggatgcg
tttcaggagtactatgcaggacccgcggagatcgatcaggtggtgttccgcccgctgacg
aaccccgcgacacggacggcggccctgctgaccggagagctggatatcgtgcaggatctc
tcggtgcgcgatgtggaacgggttgccgcggaggacggatttgaggtcgtcacgcggccc
agccttctgaacctcgttctggcactggatgtgcgcccccaatcgccgacaatcgatctc
gacaccaacccgatgaccgacaggcgcgtgcgggaggcgattgcccgcgcgatcgatgtg
gagacgatccgcacggtgatcatgaacgggctgtccaccccttcggagcaatatgtcccc
tccacccatgtgggatatctcgaaggcgccaatttccgcgagatgtacccgttcgatctg
gaggcggcccgggctctgatggccgaggcgggatatgcggacggcttcaccatgaccctt
gacgccaccaacaaccgctatgtgaacgatgcgcagatcgcccaggcgctggcctcgatg
ctgtcgcagatcgggatcacgctggagttgaacctgatgccgcgcgcgaacttcttcggc
tacatccgggtgccgtccgagcagtcgagcttcatcatgtccggctgggatgtgccgtcg
ggcgatgccggatcgatgtatgccagcatgttctattcgcccggcacccgcgaagggtat
tcgcaggtcaaccgcggccactactccaacccggaagtggaccgtctgatcgatctggcg
gactcgaccccgcggatcgacgagcgcgatgcccatttgcagcaggtcaccgaaatcctg
ttgcaggacattccgatgatcccggttcattacgaacaggatatctacggcgtgcgcgac
gggatcgagtttgaaccccggacagacaagttcctctgggcttacgacatccgcatcacc
gagtga
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