Rhodophyticola porphyridii: ABWH90_18080
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Entry
ABWH90_18080 CDS
T11241
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
rpoh Rhodophyticola porphyridii
Pathway
rpoh03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rpoh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ABWH90_18080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rpoh03400
]
ABWH90_18080
Enzymes [BR:
rpoh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
ABWH90_18080
DNA repair and recombination proteins [BR:
rpoh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
ABWH90_18080
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
XHC06423
LinkDB
All DBs
Position
3621098..3621886
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AA seq
262 aa
AA seq
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MSFSLATWNINSVRLRADLVTKLLREEAPDVLCLQECKSPVDKIPVELFAAAGYRHIVAR
GQKGYNGVAILSKLPVEDVGHRDFVARGDARHVAARLENGVTIHNFYVPAGGDLPDREVN
EKFGHKLDFLTEMRDWFHGETPAKSILVGDLNIAPREDDVWSHKQLLKVVSHTPIEVDHL
AQVQDSAGWVDVTRKDIPEGQLYSWWSYRARDWDAADKGRRLDHVWATPDIANAAHGSRV
LRDARGWEKPSDHAPVFATFDL
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgtccttttcccttgccacatggaatatcaactcggtccggctgcgtgcggatcttgtg
acgaagcttcttcgcgaggaagcgccggatgtgctgtgccttcaggaatgcaaatcgccg
gtcgacaagatcccggtcgagctgttcgccgcggcgggctatcgccatatcgtggcccgt
ggccagaagggctataacggtgtggccatcttgtcgaaactgccggtcgaagacgtgggc
catcgcgatttcgttgcccggggcgatgcgcgccatgtggcggccaggctcgaaaacggc
gttacgattcacaacttctacgtccccgccggtggtgatctcccggaccgggaggtgaac
gagaaatttggccacaagctcgattttctgacggagatgcgggattggtttcacggggaa
acccccgcgaaaagcattctggtcggcgatctgaacatcgcgccgcgtgaagacgatgtc
tggtcccacaagcaattgctgaaagtggtcagccatacaccgatcgaggtcgaccatctt
gcgcaggtgcaagacagcgccggttgggtcgacgtgacgcgcaaggatatcccggaaggg
cagctctattcctggtggtcctaccgggcacgggactgggatgcagcggacaagggccgc
aggctcgatcatgtctgggccacgccggatatcgccaacgcggcccacggctcgcgcgtg
ttgcgtgatgcgcgggggtgggaaaaaccgtccgaccatgcaccggtattcgccacattc
gatctgtga
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