Rhodophyticola porphyridii: ABWH90_18875
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Entry
ABWH90_18875 CDS
T11241
Name
(GenBank) TRAP transporter substrate-binding protein
KO
K11688
TRAP-type transport system periplasmic protein
Organism
rpoh Rhodophyticola porphyridii
Pathway
rpoh02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
rpoh00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
ABWH90_18875
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rpoh02000
]
ABWH90_18875
Transporters [BR:
rpoh02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
ABWH90_18875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DctP
TAT_signal
Yop-YscD_ppl_3rd
RT_RNaseH
RT_RNaseH_2
SBP_bac_3
Motif
Other DBs
NCBI-ProteinID:
XHC06566
LinkDB
All DBs
Position
complement(3780617..3781618)
Genome browser
AA seq
333 aa
AA seq
DB search
MFNRRQVLGGGLGAAALMLGGPAQAQQRTLKFASATLNDVQHQYQQRFAERLAVVSDTTT
VELYPASQLGPIPRMVEGVMFGTIESFITATAFLSQVDPRFQVFDVATIFRDPEATRDLF
AGEEFRSRVRTFGNAQNIEPISTFVHSPNTIISKRPIRSLNDLSGLKIRVLGTPFQIEPM
RALGATPVPMPLSEVMPALQTGTIDAVISAPTVAAAFRYYDAASYMTMIDSWPLIVTVAT
SRSWLNGLPDDVRTQIVSVARDTEAEAVEWGAADVTRAAEAWVANGGEVIPLEADMEAAL
QSTIAEATAPLIDASTPLSEEVAALSRMVEEAG
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgttcaacagacgacaagttctcggtgggggcctaggagccgccgctctcatgttgggt
ggtccggctcaagcgcagcaacgaacgctcaaattcgcctccgcgacgctcaacgacgtc
cagcatcaataccagcaacgctttgccgaacggctggcagtcgttagcgacaccaccacc
gtggaactgtatccggcgagccaactcggtccaatcccgcgcatggtcgaaggcgtcatg
ttcggtacgatcgagagcttcatcacggccaccgcctttctaagccaggtggacccgcgc
tttcaggtattcgacgttgcgacgattttccgtgatccggaggcaacccgtgatcttttt
gcaggcgaggaattccggtcgcgcgtgcgcacgttcggcaatgcacagaacatcgaacct
atttcgaccttcgtgcacagcccgaacacgatcatctcgaaacgaccaatccgctctctg
aacgatctgtccggcctgaagattcgcgttctgggcacgcctttccagatcgagccgatg
cgtgcgctcggcgcgacgccggtgccgatgccgctgtcggaagtcatgcctgcgcttcag
acgggaacgatcgatgcagtcatttccgcgcctaccgtggccgctgcgtttcgctactac
gacgcggcatcctacatgacgatgatcgatagctggccgctgatcgtgaccgtagcaacg
tcgcgaagctggctcaacggccttcccgatgatgtccgcacgcaaatcgtaagcgtcgca
cgggataccgaagcggaagcggtggagtggggcgctgccgacgtcacccgcgccgccgag
gcgtgggtcgccaatggcggcgaggtcataccgctcgaagccgacatggaggcggcactt
caatcaacgatcgctgaggccactgcgcctctaatcgacgcgagcacgccgctgtccgaa
gaggtcgcagcgctcagccgaatggtagaggaggccggttga
DBGET
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