KEGG   Roseobacter ponti: G3256_00910
Entry
G3256_00910       CDS       T06561                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
rpon  Roseobacter ponti
Pathway
rpon03030  DNA replication
rpon03410  Base excision repair
rpon03420  Nucleotide excision repair
rpon03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:rpon00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    G3256_00910 (polA)
   03410 Base excision repair
    G3256_00910 (polA)
   03420 Nucleotide excision repair
    G3256_00910 (polA)
   03440 Homologous recombination
    G3256_00910 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rpon03032]
    G3256_00910 (polA)
   03400 DNA repair and recombination proteins [BR:rpon03400]
    G3256_00910 (polA)
Enzymes [BR:rpon01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     G3256_00910 (polA)
DNA replication proteins [BR:rpon03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     G3256_00910 (polA)
DNA repair and recombination proteins [BR:rpon03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     G3256_00910 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     G3256_00910 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc DNA_polI_exo1
Other DBs
NCBI-ProteinID: QJF49827
UniProt: A0A858SP78
LinkDB
Position
complement(192587..195391)
AA seq 934 aa
MSDSSFGKGCHLHLIDGSAFIFRAYHALPPLTRKSDGLPIGAVSGFCNMLHRYVEGNTGP
DAPTHVAVIFDKGSHTFRNDMYDQYKANRDAMPEDLRPQIPLTRRATEAFNIACKEKEGY
EADDIIATLAVQARAAGGRCTIISSDKDLMQLVGDGVEMLDAMKNKRIDREGVFEKFGVY
PDRVVDVQALAGDSVDNVPGAPGIGIKTAALLINEYGDLEALLERAEEIKQPKRRQTLID
HAEQIRLSRRLVLLDENTPLDFTLDDLEVRDPLPDQLMPFLAEMEFRTLTKRIADHLDVE
MPEIDDTPASAPDAPEIEDVPFDKEGYEMVGDSAALQSRIDRIYELGYVAVDTETTSLDE
MRADLVGISLCVEPGSACYIPLTHKAHRGDDLFGSDDLAEGQMALEEALSMLKPVLEDPS
ILKIGQNMKYDAKIFAQAGIDVAPIDDTMLMSYAMHAGLHGHGMDALAERYLGHTPIPIK
PLLGSGKSAITFDKVPLEDAVPYAAEDAEITLRLWQQFKPSLHRAQVTRVYETMERPLVP
VLAAMERTGIEVDRDTLSRMSNAFSQKMAGLEDEIYGVAGRKFNVGSPKQLGEILFDEMA
LEGGKKGKTGAYATGADVLEDLATEHELPRLILDWRQLSKLKSTYTDALQDHINPDTGRV
HTSYSIAGASTGRLASTDPNLQNIPIRTEEGRRIREAFVAGEGKTLVALDYSQIELRILA
HIADIPALKQAFADGQDIHAMTASEMFDVPMDEMTPDVRRRAKAINFGVIYGISGFGLAR
NLRIPRSEAQGFIDRYFERFPGIRTYMDDTKAFAKENGYVETLFGRRIHTPNITDKGPRA
GFAQRAAINAPIQGTAADVIRRAMIRMPAAIRDLPAKMLLQVHDELLFEVEQGAEDDLIT
AARDVMENAADPVVKLDVKLTVDAGQGANWAVAH
NT seq 2805 nt   +upstreamnt  +downstreamnt
atgagcgacagcagctttggcaaagggtgtcacctgcacctgatcgacggatcggcgttc
atcttccgggcctatcacgcgctgccgccgctcacgcggaaatctgacggcctgccgatc
ggggctgtctcggggttctgcaacatgctgcaccgctatgtcgaagggaacaccgggccg
gatgcccccacccatgttgccgtcatctttgacaagggcagccatactttccgcaacgat
atgtacgatcagtacaaagccaaccgggatgcgatgcccgaggacctgcgcccgcagatc
ccgctgacccggcgcgccaccgaagccttcaacatcgcctgcaaggaaaaggaaggctat
gaggccgacgatattatcgccactctcgccgtgcaggcccgtgccgccggcgggcgttgc
accatcatcagctctgacaaggatctgatgcagctcgtcggtgacggtgtcgaaatgctg
gacgcgatgaagaacaaacgcattgaccgcgagggtgttttcgaaaagttcggcgtttat
cccgaccgcgttgtcgatgtgcaggcgctggccggcgattctgtcgataacgttcctggc
gcgcccggtatcgggatcaaaaccgcggctttgctgatcaacgaatatggcgatctggaa
gcgctgctggagcgcgcagaagagataaaacagccaaaacgccggcaaaccctcattgat
catgccgaacagatccggctgtcacgccgtctggtgctgcttgacgagaataccccgctg
gatttcacgcttgatgatctggaggtgcgcgatccgctgcccgatcagctgatgcccttc
cttgcggagatggaatttcgcacgctcaccaaacgtatcgcggatcatctggacgtggaa
atgcccgagatcgacgacaccccggccagcgcgccggatgcgcccgagatcgaggacgtc
ccgtttgataaagaaggctatgaaatggtcggtgactctgccgccctgcagagccggatc
gatcggatatatgaactgggctatgtggcggtcgataccgaaaccaccagccttgatgaa
atgcgcgcggatctggttggcatttcgctctgcgtcgagccgggcagcgcctgctacatc
ccgctgacgcataaagcgcaccggggcgatgatctctttggttcagacgatctcgcagag
ggtcagatggccctggaggaggcgctgagcatgctgaagcccgtgctggaggatccgtcg
atcctgaagatcgggcagaatatgaaatacgatgccaagatttttgctcaggctggcata
gatgtggcccccatcgatgacacgatgctgatgtcttatgcgatgcacgcaggtctgcac
gggcatggtatggatgcccttgcagaacgctatctgggtcacacaccgatcccgataaag
cccctgttaggctctggtaaatccgcgattacctttgacaaagtgccgctggaagatgcc
gttccatatgctgctgaagacgctgagatcacgctgcgcctctggcagcagttcaaaccg
tcgctgcaccgcgcacaggtcacgcgggtttatgagaccatggagcgcccgctggtgccg
gtgcttgccgcgatggagcgtaccggcattgaggttgaccgcgacacgctctcgcgcatg
tcgaacgccttcagtcagaagatggccggtctggaagatgaaatctatggcgtggcaggg
cgcaaattcaacgtgggctcgcccaaacagctgggcgagattctctttgatgaaatggcg
cttgagggaggcaaaaagggcaaaaccggcgcctatgcaaccggcgcggatgtgctggaa
gacctcgccacggagcatgaactgccgcgcctcatcctcgactggcggcagctcagcaag
ctgaaatcgacctatacagatgccctgcaggatcatatcaaccctgacaccgggcgtgtg
catacgtcctattcgatcgccggcgcctcgaccggcaggctcgcctcgaccgatcccaac
ctgcagaatatcccgatccgcaccgaggaaggccgccggatccgtgaggcattcgtcgcc
ggagagggtaaaaccctggtggcgctggattacagccagatcgagctgcgcatcctggct
catatcgcggacatcccggcgctgaagcaggcctttgccgatggtcaggacattcacgcc
atgaccgcatctgagatgttcgatgtgccgatggacgaaatgacacccgacgtcagaaga
cgtgccaaggcgatcaacttcggggtgatctacggcatctcggggtttggtctggcgcgt
aacctgcgcatcccgcgctctgaggcgcagggcttcatcgaccgctatttcgagcgcttt
cccggcatccgcacctacatggacgataccaaagccttcgcgaaggaaaacggttatgta
gagacgcttttcgggcgccgcatccacacgcccaacatcaccgacaaaggcccgcgcgcc
ggatttgcccagcgcgcggcgatcaatgcgccgatccagggcaccgccgccgatgtgatc
cggcgcgcgatgatccggatgcccgccgcgatccgcgatctgccggcgaaaatgctgctg
caggtccatgacgaactgcttttcgaagttgaacagggcgctgaggacgatctgataacg
gccgcgcgggatgtcatggaaaacgctgctgatccggtggtgaaacttgacgtgaagctg
actgttgatgcgggccagggcgcgaactgggccgttgctcactga

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