Roseobacter ponti: G3256_01425
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Entry
G3256_01425 CDS
T06561
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
rpon
Roseobacter ponti
Pathway
rpon03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rpon00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
G3256_01425 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rpon03019
]
G3256_01425 (pnp)
03016 Transfer RNA biogenesis [BR:
rpon03016
]
G3256_01425 (pnp)
Enzymes [BR:
rpon01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
G3256_01425 (pnp)
Messenger RNA biogenesis [BR:
rpon03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
G3256_01425 (pnp)
Transfer RNA biogenesis [BR:
rpon03016
]
Prokaryotic type
tRNA degradation factors
G3256_01425 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
RNase_PH_C
KH_1
PNPase
S1_RRP5
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-ProteinID:
QJF49922
UniProt:
A0A858SPX1
LinkDB
All DBs
Position
complement(298009..300147)
Genome browser
AA seq
712 aa
AA seq
DB search
MFNEVKKSMQWGEETLTLETGKVARQADGSVIATLGETSVMANVTFAKKQKPGQDFFPLT
VHYQEKYYAAGKVPGGFFKREARPTEKETLTARLIDRPLRPLFVPGFKNEVLVMCTVLSH
DLVNDPDMVAMIAASAALTISGAPFMGPIGGCRVGFEDGEYILNPTVDDMQDLRLNPEQR
LDLVVAGTKDAVMMVESEAYELTEEEMLGAVKFAHEQIQPVVDLIIGLAEDAAKEPFDFQ
PADYSELAAKVRLEGEAAMRAAFALTDKQERTAAVSKARDEILSKLSEEEQADPNLGSAM
KGLEASILRGDVVKTGKRIDGRATDEIRDIVCETGLLPRTHGSALFTRGETQGLVVTTLG
TGDDEQFIDALHGNFKSNFLLHYNFPPYSVGEAGRVGPPGRREIGHGKLAWRALQAVLPA
STDFPYTIRVVSEITESNGSSSMASVCGGSLSMMDAGVPLKSAVAGVAMGLILEDDGEYA
ILSDILGDEDHLGDMDFKVAGTEAGITSLQMDIKIAGITPEIMEKALAQAKAGRLHILGE
MNKALTGAADFSIHAPRIETMQVPTDKIREVIGSGGKVIREIVEVSGAKVDINDEGIIKI
ASPNGDSIKKAYDMIHAIVAEPEEGQVYTGTVVKIVDFGAFVNFFGKRDGLVHVSQIENR
RLNHPSDVLKEGQEVKVKLLGFDDRGKVRLSMKVVDQETGEEIKKEEAPADE
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgttcaacgaagtgaaaaaatccatgcagtggggcgaagaaacgctcacactggaaaca
ggaaaagtggcccgtcaggcggacgggtcggtgattgcaacgcttggcgaaaccagcgtt
atggcaaacgtcacctttgccaagaaacaaaaacccggtcaggatttctttccgctgacc
gtgcactatcaggaaaaatattacgccgccggcaaagtgcctggcggttttttcaagcgt
gaagcacgcccgaccgagaaagagacgctgaccgcgcgtctgattgaccggccgctgcgt
ccgctctttgtccccggcttcaaaaacgaagttctggtgatgtgtaccgttctctcacac
gacctggtcaacgatccggacatggttgcgatgattgcggcttctgccgcgctgaccatc
tcgggcgcgccattcatgggcccgatcggcggttgccgcgttggtttcgaggatggcgaa
tacatcctgaacccgactgtggacgacatgcaggacctgcgcctgaaccccgagcagcgc
cttgatctggttgtcgccggcaccaaagacgccgtgatgatggtcgaatccgaagcctat
gagctgaccgaagaagagatgctgggtgcggtgaagttcgcccacgagcagatccagccg
gttgtcgatctgattatcggtctggctgaagacgcggcgaaagagccgtttgatttccag
cccgctgattattcggaacttgcggctaaagtcagacttgagggtgaggcagccatgcgc
gcggcctttgcactcacagacaagcaggaacggactgccgccgtcagcaaggcacgcgac
gagatcctctcgaagctgtccgaagaagagcaggccgacccgaacctcggctccgcgatg
aagggccttgaagcctccatcctgcgcggtgacgtcgtgaagaccggcaagcgtattgac
ggccgcgcgactgatgaaatccgcgatatcgtttgtgaaacgggcctgctgccccggaca
catggctctgccctcttcacccgcggtgagacacagggcctcgtcgtgaccacgctgggc
accggcgacgatgagcagttcatcgacgcgctgcacggcaacttcaaatccaacttcctg
ctgcactataacttcccgccctactctgtcggtgaagctggtcgcgtgggccctccgggt
cgtcgcgaaatcggccacggcaaactggcgtggcgtgcgctgcaggcggttctgccggca
tcgacagacttcccctacacaatccgcgtggtctccgagatcaccgaatccaacggctcc
tcgtcgatggcatcggtctgcggcgggtcgctcagcatgatggacgcgggcgtgccgctg
aaatccgcggtcgccggtgttgcgatgggtctgatccttgaggatgacggcgaatacgcg
atcctgtcggacatcctcggcgacgaagatcacctcggggacatggacttcaaagtggcg
ggcaccgaagccggtatcacgtcactgcagatggacatcaagatcgcaggcatcacgccc
gagatcatggaaaaagctctggcacaggccaaagcgggccgtctgcacatccttggcgag
atgaacaaagcgctgaccggtgctgcggacttctcgatccacgcgccgcgcattgagaca
atgcaggtgccgaccgacaaaatccgcgaagtcatcggatcgggcggcaaagtaatccgc
gagatcgtcgaggtttccggcgccaaggtcgacatcaacgacgaaggcatcatcaagatc
gcgagccccaacggcgactcgatcaagaaagcctatgacatgatccacgccatcgtggcc
gagcctgaagagggccaggtttataccggtacggttgtgaagatcgtcgatttcggcgcc
ttcgtgaacttctttggcaagcgtgacggtctggtgcatgtgtctcagatcgagaaccgt
cgcctgaaccacccctcggatgtgctaaaagaaggccaggaagtaaaagtgaagcttctg
ggctttgacgatcgcggcaaggtgcgtctgtcgatgaaagtcgtcgatcaggagaccggc
gaagagatcaaaaaagaagaagcgccggccgacgaataa
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