Roseobacter ponti: G3256_02830
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Entry
G3256_02830 CDS
T06561
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
rpon
Roseobacter ponti
Pathway
rpon03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rpon00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
G3256_02830 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rpon03021
]
G3256_02830 (rpoB)
03400 DNA repair and recombination proteins [BR:
rpon03400
]
G3256_02830 (rpoB)
Enzymes [BR:
rpon01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
G3256_02830 (rpoB)
Transcription machinery [BR:
rpon03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
G3256_02830 (rpoB)
DNA repair and recombination proteins [BR:
rpon03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
G3256_02830 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_45
RnfC_N
Motif
Other DBs
NCBI-ProteinID:
QJF50174
UniProt:
A0A858SMX4
LinkDB
All DBs
Position
575162..579298
Genome browser
AA seq
1378 aa
AA seq
DB search
MAQSFLGQKRLRKYYGKIREVLEMPNLIEVQKSSYDLFLNSGDADVPTDGEGITGVFQSV
FPIKDFNETSVLEYVKYELEKPKYDVEECQQRDMTYSAPLKVTLRLIVFDIDEDTGAKSV
KDIKEQDVFMGDMPLMTPNGTFVVNGTERVIVSQMHRSPGVFFDHDKGKTHSSGKLLFAC
RIIPYRGSWLDFEFDAKDIVFARIDRRRKLPVTTLLYSLGLDQEAIMDAYYNTVTYKLKK
NKGWVAPFFPDRVRGTRPTYDLVDAKTGEVLFEKGKKVTPRAVKQLVDEGKVTELLLPFE
HIAGKFAAKDIINEENGAIYVEAGDEMTLEYDKDGTLIGGTAKELVDAGVTEIPLLDIDN
VNVGPYMRNTMAQDKNMNRDTALMDIYRVMRPGEPPTVEAASALFDTLFFDSERYDLSAV
GRVKMNMRLALDAEDTQRTLRREDIVACIKALVDLRDGRGDIDDIDHLGNRRVRSVGELM
ENQYRVGLLRMERAIKERMSSVEIDTVMPQDLINAKPAAAAVREFFGSSQLSQFMDQTNP
LSEVTHKRRLSALGPGGLTRERAGFEVRDVHPTHYGRMCPIETPEGPNIGLINSLATFAR
VNKYGFIETPYRKVENRKVTDEVQYMSATEEMRHTVAQANANLDENMVFVNDLVSTRKSG
DYTLSPSESVDLIDVSPKQLVSVAASLIPFLENDDANRALMGSNMQRQAVPLLQAEAPLV
GTGIEEVVARDSGAAIMAKRAGVIDQVDASRIVIRATEDLELGDAGVDIYRMRKFQRSNQ
NTCINQRPLVKVGDRVSKGQVVADGPSTDMGELALGKNVVVAFMPWNGYNYEDSILISER
IARDDVFTSIHIEEFEVAARDTKLGPEEITRDIPNVGEEALRNLDEAGIVYIGADVEPGD
ILVGKITPKGESPMTPEEKLLRAIFGEKASDVRDTSLRVKPGDFGTVVEVRVFNRHGVEK
DERALQIEREEVERLARDRDDELAILDRNIYARLKDLILGKTAVKGPKGFKSNSEITEDA
LEMLTRGQWWQLALKDEADAQIVEALNEQYEIQKRALDARFEDKVEKVRRGDDLPPGVMK
MVKVFVAVKRKLQPGDKMAGRHGNKGVISKVVPMEDMPFLADGTPVDFCLNPLGVPSRMN
VGQILETHMGWAARGLGVNVDEALQDYRRSGDLTPVREALSLAYGEDVYEEGIAGMDEET
LVEAAGNVTRGVPIATPVFDGAKEADVNDALKRAGFDTSGQSVLFDGRTGEQFARPVTVG
VKYLLKLHHLVDDKIHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQ
EMLTVKSDDVAGRTKVYESIVKGEDNFEAGVPESFNVLVKEVRGLGLNMELLDAEEDE
NT seq
4137 nt
NT seq
+upstream
nt +downstream
nt
atggctcaatcgttccttggccagaaacgtctacgtaaatattatggcaaaatccgtgaa
gttctggagatgccaaacctgatcgaggttcagaaatcctcgtatgatctcttcctgaat
tccggcgatgccgacgtccccacggacggcgagggcattaccggtgttttccagtcggtt
ttcccgatcaaggatttcaatgaaacatccgtgcttgagtacgtcaagtacgagcttgaa
aagccgaagtacgacgttgaggaatgtcagcagcgcgacatgacctattccgcgccgctc
aaagtgacgctgcgcctcatcgtgtttgatattgacgaagataccggagcgaaatcggtc
aaagacatcaaggaacaggatgtctttatgggggatatgcccctgatgacgccgaacggc
acctttgttgtgaacggcacggagcgcgtgatcgtgtctcagatgcatcgctcgcccggt
gtgttctttgaccacgacaagggcaaaacacactcctccggtaagctgctttttgcctgc
cgcatcatcccctaccgcggctcctggctggacttcgagttcgacgccaaagacattgtt
tttgcgcgcatcgaccgccgccgcaaactgcctgtcacgacgctcctgtattcgcttggt
ctcgaccaggaagcgatcatggacgcctattacaacaccgtcacctacaagctgaaaaag
aacaaaggctgggtcgccccgttcttccctgatcgtgtgcgcgggacccgcccgacgtat
gatctggtcgatgcgaaaaccggtgaggtcctgttcgagaaaggcaaaaaagtaacaccg
cgcgcggtgaaacaacttgtcgatgaaggcaaagtaaccgagctgctgctgccgttcgag
cacatcgccggtaagttcgccgccaaggatatcatcaacgaagaaaacggcgcgatctat
gtcgaagccggtgatgagatgacgctggagtacgacaaggacggaacgctcatcggcggg
acggccaaagagctcgttgatgccggggtgaccgagatcccgcttctcgacatcgacaac
gtcaatgtcggcccctacatgcgcaacaccatggcgcaggacaagaacatgaaccgcgac
accgcgctcatggatatctaccgcgtcatgcgcccgggcgagccgcccaccgttgaagcg
gcatctgcgcttttcgacacgctctttttcgacagcgagcgttatgacctttccgcggtc
ggtcgtgtgaagatgaacatgcgtctcgcactcgacgctgaagacacacagcgtacgctg
cgtcgcgaagatatcgtggcctgtatcaaggcgctggtggatctgcgcgacggtcgtggc
gacattgacgacattgaccacctcggcaaccgccgcgtgcggtcagttggtgagctgatg
gagaaccagtatcgcgttggtctcttgcgcatggagcgcgcgatcaaagagcgtatgtcg
tccgtcgagatcgacacggtgatgccgcaggatctgatcaacgccaagccggcagccgcc
gcagtgcgtgaattctttggctcctcgcagctgtcgcagttcatggaccagacgaacccg
ctctctgaggtgacgcacaagcgtcgtctttcagcgctcgggccgggtggtctgacgcgg
gaacgcgcgggctttgaggtgcgcgacgtacatccgacgcactatggccggatgtgcccg
attgagacgcctgaagggccgaacattggtctgatcaacagcctcgcgacattcgctcgg
gtgaataaatacggcttcatcgagacaccgtaccgcaaggtcgagaaccgcaaggtgacc
gatgaagtgcagtacatgtccgcgaccgaggaaatgcgtcacaccgtggcgcaggcgaac
gccaacctcgacgagaacatggtgtttgtgaacgatctggtgtcgacccgtaaatccggc
gactacaccctgtcgccgtctgaaagcgttgatctgatcgacgtatctccgaaacagctg
gtctctgttgcggcttcgcttattccgtttctggaaaatgacgacgccaaccgcgctctg
atgggctcgaacatgcaacggcaggctgtgccgcttctgcaggccgaggcgcctcttgtg
ggcactggcatcgaagaagttgtggcgcgcgattccggcgcggcgatcatggcgaaacgc
gcaggcgtgatcgaccaggttgacgccagccggattgtgatccgggcaacggaagatctt
gagctgggtgatgcgggtgtggacatctaccgcatgcgcaaattccagcgctccaaccag
aacacctgtatcaaccagcgtccgctggtgaaggtgggtgaccgggtttccaaaggccag
gtggttgccgatggcccgtcaacggacatgggggagctggcgctcggcaagaacgtcgtc
gtcgcgttcatgccctggaacggctacaactacgaagactccatcctgatctccgagcgg
attgcccgtgacgacgtcttcacctcgatccacatcgaggaatttgaagtcgccgcgcgt
gacaccaagctggggccggaagagatcacccgcgatatcccgaacgtcggcgaggaagcc
ctgcgcaatctcgacgaggcgggtatcgtttatatcggcgcggacgtagagcccggcgat
attctggtgggcaaaatcactccgaaaggcgagagcccgatgacgccggaagagaaactc
ctgcgcgccatcttcggggagaaagcctctgacgtgcgcgacacttcgctgcgcgttaaa
ccgggtgatttcggaacggtcgtcgaagtgcgcgtctttaaccgccatggtgtggaaaaa
gacgaacgtgcgctgcagatcgagcgcgaagaggtggaacgcctggcccgtgaccgcgat
gacgaactcgcgatcctggaccggaacatctatgcccgtctcaaggacctgatcctcggc
aaaaccgctgtgaagggccccaaaggcttcaagtccaattccgagatcaccgaagacgcc
ctggagatgctgacccgtggtcagtggtggcagctggctctgaaagacgaggcagacgca
cagatcgtcgaggctctgaacgagcagtacgagatccagaaacgggctcttgatgcgcgc
tttgaggataaggtcgaaaaagtccgtcgtggcgatgatctgcccccgggcgtgatgaag
atggtcaaggtgttcgttgcggtgaagcgcaagctgcagccgggcgacaagatggccgga
cgtcacggcaacaaaggcgtgatttccaaagtggtccccatggaggacatgccgttcctt
gcggacgggacaccggtggatttctgtctgaacccgctgggcgtgccgtcgcgtatgaac
gtcggtcagatcctcgagacgcatatgggctgggccgcacgtggtctgggtgtcaatgtg
gacgaggcgctgcaggactatcgccgctccggtgatctgacacctgtgcgtgaagctctg
agccttgcctatggcgaagacgtctatgaagagggcatcgccggcatggacgaagaaacc
ctcgttgaggctgcgggcaatgtcacgcgcggtgtgccgattgcgacgccggttttcgat
ggcgccaaagaggcagacgtgaacgatgcgctgaagcgggccgggtttgatacctcgggc
cagtcggtgctttttgacggccgtacaggcgagcagtttgcccgcccggtcaccgtcggc
gtcaaatacctgctgaaactgcaccaccttgtggatgacaagatccacgcgcgctcgacc
gggccttacagcctcgtcacccagcagccgctgggcggtaaagcgcagtttggtggtcag
cgcttcggtgagatggaggtctgggctctggaagcttacggcgctgcatacaccctgcag
gaaatgctgaccgtgaagtcggacgacgtggccggacggacgaaagtctatgaaagcatc
gtcaaaggcgaggacaactttgaagcgggcgtgcccgagagcttcaacgttctggtcaaa
gaagtccgtggcctcggcctcaacatggaactcctggacgctgaggaagacgaataa
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integrated database retrieval system
