Roseobacter ponti: G3256_03075
Help
Entry
G3256_03075 CDS
T06561
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
rpon
Roseobacter ponti
Pathway
rpon03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rpon00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
G3256_03075
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rpon03021
]
G3256_03075
03400 DNA repair and recombination proteins [BR:
rpon03400
]
G3256_03075
Enzymes [BR:
rpon01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
G3256_03075
Transcription machinery [BR:
rpon03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
G3256_03075
DNA repair and recombination proteins [BR:
rpon03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
G3256_03075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
DUF4249
Glyco_hydro_65C
Motif
Other DBs
NCBI-ProteinID:
QJF50222
UniProt:
A0A858SQU9
LinkDB
All DBs
Position
617967..618983
Genome browser
AA seq
338 aa
AA seq
DB search
MIHKNWAELIKPQQLDVKPGNDPARQATVTAEPLERGFGLTMGNALRRVLMSSLQGAAIT
SVQIDNVLHEFSSVAGVREDVTDIILNLKGVSIRMEVEGPKRLSISAKGPGVVTAGDISE
SAGIEVLNRDHVVCHLDDGADLYMELTVNQGKGYVSAEKNKPEDAPIGLIPIDAIYSPVK
KVSYDVQPTREGQVLDYDKLTMKVETDGSLTPDDAVAFAARILQDQLGIFVNFDEPESAS
RADEDDGLEFNPLLLKKVDELELSVRSANCLKNDNIVYIGDLIQKTEAEMLRTPNFGRKS
LNEIKEVLSGMGLHLGMDVEDWPPDNIEDLAKKFEDSF
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgatccacaagaactgggctgaacttatcaagccgcaacagcttgacgttaaaccgggc
aatgatccggcacgccaggcaaccgttaccgcggaaccgctcgagcgcggctttggcctg
acaatgggcaacgcgctgcgccgtgtgctgatgtcgtcgctgcagggtgcggcgatcaca
tccgttcagatcgataacgtgctgcacgagttttcatcggtggccggtgtgcgtgaagac
gtgaccgacatcattctgaatctcaaaggcgtgtcgatccgcatggaagtcgagggaccc
aagcgtctgtcgatctctgccaaggggccgggcgttgtgaccgcgggtgacatttcggaa
tccgcaggaatcgaagtgctgaaccgcgatcacgtggtctgccaccttgacgatggtgcc
gatctttacatggaactgaccgtcaaccagggcaaaggctatgtttctgcagagaaaaat
aagcctgaagatgcgcccatcggtcttattccgatcgatgcaatctattcgccggtcaag
aaggtcagctatgacgtgcagcccacccgtgagggccaggtgctggattatgacaagctg
acgatgaaggttgaaaccgacggatcgcttacacctgatgatgctgtggcttttgctgcg
cgcattctgcaggatcagctgggcatcttcgtgaactttgatgagcctgaatctgcatcc
cgcgcggatgaggacgatggtctggagttcaacccgctgcttctcaagaaagtcgacgag
ctggagctttccgtccgttcggccaactgtctgaagaacgacaatatcgtttatatcggc
gatctcattcagaagaccgaagcagaaatgctgcgtacgccgaactttggccgtaagtct
ctgaacgagatcaaggaagtgctttcgggcatgggtctgcatcttggcatggacgttgaa
gactggccgccggacaacatcgaagatctggccaagaaattcgaagactccttctga
DBGET
integrated database retrieval system
