Roseobacter ponti: G3256_03580
Help
Entry
G3256_03580 CDS
T06561
Name
(GenBank) L,D-transpeptidase family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
rpon
Roseobacter ponti
Brite
KEGG Orthology (KO) [BR:
rpon00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rpon01002
]
G3256_03580
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rpon01011
]
G3256_03580
Peptidases and inhibitors [BR:
rpon01002
]
Cysteine peptidases
Family C82
G3256_03580
Peptidoglycan biosynthesis and degradation proteins [BR:
rpon01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
G3256_03580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
QJF53090
UniProt:
A0A858SXW2
LinkDB
All DBs
Position
723112..724719
Genome browser
AA seq
535 aa
AA seq
DB search
MRISALLFSLCLSGSLVAGPVEDEIEKLSASFRGGDGGHSADARLDSAVLIPAFYAGRGH
APAWYGTTSGDQLFAELNRGLAQGFRPVDFNLAWLYELSDAARSGRPEDIAAFELVATDA
AIKLIHHVFFGKVDPAAIDSDWNFSRPVIRQEPAAVLNEFINGAGFSALMARVDVDALQY
RQLIDALEQYRDIANSGGWPSVPDQTVLKPGMTDPAVAVLRARLLREGAVREAAAITSVS
AGAGGAAFYDAGLVEAVKAFQGRHGLDADGVVGPRSFLSLNRTAADRVNQLRLSLERARW
LMRDLGDEFVLVNIAGARTYYVTSDDTIWSTRSVTGSAYRKTPVFRDEIRYMEFNPTWTV
PASIFRNDKLPRIRKDPGYLARNNYTVVRSDDRSPVDAAAVNWAEDNPGVTLVQQPGPQN
ALGLVKFMFPNEHAVYLHDTNERGLFDRNERNMSSGCVRLEYPFEFASLLMESDPDWSLA
RMNAILESGKTTRIDLREPVPVLLTYWTAWVEDGSVHFREDPYDRDAAVLDALNR
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgcggatcagcgcgctgcttttctccttatgtctctcgggcagcctcgtcgccggaccg
gttgaagatgaaattgagaaactgtcggcctcattccggggtggcgatggcggtcattct
gctgatgcgcggctcgacagtgcggtattgatccctgcgttttatgcgggccgcggtcat
gcgcccgcctggtacggaacaaccagcggagatcagctttttgcggaactgaaccgtgga
ttagcccagggtttccggccggtcgatttcaatctggcatggctttacgaattatccgat
gccgcccggtcgggcaggccggaggacatcgcggcatttgaacttgtggccaccgatgcg
gcgataaagctgatccaccacgtctttttcggaaaggtcgaccctgcggccattgacagc
gactggaacttttcgagaccggtcatccggcaggagccggcagccgttctgaacgaattc
atcaatggcgcagggttcagtgctctgatggcgcgtgttgatgtcgatgccctgcagtac
cggcaactgattgacgcgctggagcagtacagagacatcgcaaacagcggcggatggcct
tctgtaccggatcagacggtgctgaaaccgggcatgacggatcccgcggttgcggttctg
cgcgcgcggttactgcgcgagggggcggtacgtgaggcggcggccataacgtcagtcagc
gccggggccggcggggctgccttttacgacgccgggcttgttgaagccgtcaaagcattt
caggggcggcatgggctcgacgctgacggggtggtcgggccgaggtcatttttgtctctg
aaccggacggccgccgaccgcgtgaaccagctcaggctcagccttgagcgcgcgcgctgg
ctgatgcgggacctcggggatgagtttgtgctggtcaatatcgcgggtgcccgcacctat
tacgtcacctcggacgataccatctggagcacgcgttcagtcaccggatcggcttaccgg
aaaacgccggttttccgggatgaaatccggtatatggaattcaatcccacctggactgtg
cccgcctcgattttccgcaatgacaagctgccccggatccgcaaagacccgggatacctg
gcgcgcaacaactatactgtggtgcgcagcgacgaccgcagccccgtggatgccgccgcg
gtgaactgggcggaggataatcccggcgtgactctcgtgcagcaacccgggccgcagaat
gcacttggtctggtgaaattcatgtttcccaatgaacatgccgtctatctgcatgatacc
aacgaacgcggcctttttgaccgcaacgagcgcaatatgagctccggatgcgtaaggctc
gaatatccgttcgagtttgccagtctgctgatggaaagcgatcctgactggagcctcgcg
cggatgaatgccattctcgaaagtggtaaaaccacgcggatcgatcttcgtgagccggtg
ccggttctgctgacatactggacggcgtgggtcgaggacggcagcgtgcattttcgcgaa
gatccttatgaccgtgacgccgccgttctggacgccctgaaccggtaa
DBGET
integrated database retrieval system
