Roseobacter ponti: G3256_07525
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Entry
G3256_07525 CDS
T06561
Symbol
choW
Name
(GenBank) choline ABC transporter permease subunit
KO
K02001
glycine betaine/proline transport system permease protein
Organism
rpon
Roseobacter ponti
Pathway
rpon02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rpon00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
G3256_07525 (choW)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rpon02000
]
G3256_07525 (choW)
Transporters [BR:
rpon02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Glycine betaine/proline transporter
G3256_07525 (choW)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
SVM_signal
Motif
Other DBs
NCBI-ProteinID:
QJF51017
UniProt:
A0A858SSQ8
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All DBs
Position
1557059..1557892
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AA seq
277 aa
AA seq
DB search
MDWLTENKIPVGQWAAGFFDWLQTNGEWFFDGLAVVMEWLIDQILWVLQTPHPLVIIAAF
AALTWVLQKSWKTCIFVVLGFLFILNQDYWEEMTESITLVMSACVVCMAIGVPIGIAAAH
RPRLYQAMRPVLDLMQTLPTFVYLIPAIVFFGIGMVPGLIATVIFVLPAPIRLTHLGIST
APQPLLEAADAFGATGSQKLWKVELPWALPQIMAGLNQTIMLSLSMVVIAALVGADGLGV
PVVRALNQVNTALGFESGFIIVVVAIMLDRMLRVDRK
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atggactggcttacggaaaacaagatccccgttggtcagtgggccgccggattctttgac
tggctgcaaaccaacggcgaatggtttttcgacggcctggcggtcgtcatggagtggctg
attgaccagatcctgtgggtgctgcagacgccgcacccgctcgtgatcatcgcggccttt
gccgcgctgacatgggtgttacagaagagctggaagacatgcatctttgtggtgctcggg
tttcttttcatccttaatcaggactactgggaagagatgacggagagcatcacactggtg
atgtcggcctgtgtggtctgtatggcgatcggggtgcccatcggcattgctgccgcacac
aggccccggctttatcaggcgatgcgcccggtactcgatctcatgcagaccctgccgaca
ttcgtttatcttattccggcgattgttttctttggcatcggtatggtgccgggcctgatt
gcgacggtgatttttgttctgccggccccgatccgactgacccatctggggatcagcaca
gccccgcaaccattgctcgaagcggcggatgcctttggtgcgacgggttcgcagaagctc
tggaaggtggaacttccatgggcgctgccgcagatcatggcggggcttaatcagacgatc
atgctctcgctctcgatggtggtgattgcggctcttgtgggggctgacgggcttggtgtg
ccggttgtccgcgcacttaaccaggtgaatacagcgctcgggtttgagagcggtttcatc
attgtggttgtggcaatcatgctcgaccggatgctccgggtggatcgcaaatga
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