Roseobacter ponti: G3256_07740
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Entry
G3256_07740 CDS
T06561
Name
(GenBank) ribonuclease E/G
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
rpon
Roseobacter ponti
Pathway
rpon03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rpon00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
G3256_07740
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rpon03019
]
G3256_07740
03009 Ribosome biogenesis [BR:
rpon03009
]
G3256_07740
Enzymes [BR:
rpon01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
G3256_07740
Messenger RNA biogenesis [BR:
rpon03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
G3256_07740
Ribosome biogenesis [BR:
rpon03009
]
Prokaryotic type
rRNA processing factors
G3256_07740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
DnaJ_CXXCXGXG
Motif
Other DBs
NCBI-ProteinID:
QJF51057
UniProt:
A0A858SSU8
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All DBs
Position
1609825..1612596
Genome browser
AA seq
923 aa
AA seq
DB search
MAKKMLIDATHAEETRVVVVDGNKVEEFDFESENKRQLAGNIYLAKVTRVEPSLQAAFVD
YGGNRHGFLAFSEIHPDYYQIPVADRLALMEEERAFAEAQKAKEDDEEKPKRRSRSRSRS
RSKAESAANDDATTSKDVESDQIDGMETIDLDDEEGSSPMERVAETPVEEPSDDPETTAD
ATDGNDDAAGEDAAGEDLAPAGEDDDEEDDKPRKADASAKDDTIESVADDDDQEDIRPAR
KPRPRRYKIQEVIKVRQILLVQVVKEERGNKGAALTTYLSLAGRYCVLMPNTARGGGISR
KITNAADRKKLKEIANEIEVPQGAGLIVRTAGAKRTKAEIKRDYEYLQRLWEQIRELTLK
SIAPAKIYEEGDLIKRSIRDLYNRDIDEVFVEGERGYRIAKDFMKMIMPSHAKNVKLYAE
GLPLFARYQVESYLASMFNPTVQLPSGGYIVIGVTEALVAIDVNSGRATKEGSIEQTATK
TNLEAAEEVARQLRLRDLAGLIVIDFIDMDERKNNAAVEKRMKDKLKTDRARIQVGRISG
FGLMEMSRQRLRPGMIEATTQPCHACHGTGLIRSDDNLALSIIRQIEEEGTRKRSREVLV
KAPVGIANFLMNHKREHIAQIEGRYGLSVRIEGDPTLVSPDFSLEKFKTATRVVRAVEHV
VSVDTSLMDEIDAGEDEVEAVADEAPAAPGAAAPQNDGDRDGDGDGEGKPKRRRRRRRRS
RSKNSNGEHQNGENHNGAQPNAEDSDSAGNEKAGETAAAAADSSSDEVNASGAETADAEE
KPSKPKTRSRTRKPKAEPEAAPADETRADAPAPDAEAAEPEAKPKTPRKRASRAKTAKAS
DSTAENTPAVNGADQDAAAADAVADAPAKPAETPAQEMPEPVAETAEPAAQTPAPEPEAA
EPVADAPEKASKPKRKGWWSLGG
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atggctaagaaaatgcttatcgatgccacccacgcggaagagacccgcgtcgtggtggtg
gacggaaacaaggtcgaggagttcgattttgaatccgagaataaacgccagctcgctggc
aacatctatctcgcaaaagtaacacgggtcgagccgtcgcttcaggcggcctttgtggac
tatggcggcaaccgtcatggttttctggcgttctcggagatccacccggattattatcag
atccccgtcgcggaccgtctggctctgatggaagaagaacgtgcctttgccgaagcgcag
aaggccaaagaagacgacgaagaaaaacccaaacgccgcagccgctcgcgcagccgctcg
cgctctaaagctgagagtgccgcaaacgacgacgcgaccaccagtaaggacgtggaatcc
gatcagatcgacggtatggaaaccatcgatctggacgacgaggaaggttcctcgccgatg
gagcgcgtggcggagacgcctgtggaagagccttctgacgatccggagaccactgctgac
gcaacggatggcaatgacgatgccgccggtgaagatgcagccggcgaagacctcgcccct
gcgggtgaggacgatgacgaggaggatgacaaaccgcgcaaagcggatgcctcggccaag
gacgataccatcgaatccgttgcagacgacgacgaccaggaagatatccggccggcgcgc
aaaccgcgcccgcggcgctataagatccaggaagtcattaaagtccgtcagatcctgctc
gttcaggtcgtcaaagaagagcgcggcaacaagggtgcggcacttacaacctatctcagc
cttgccggtcgttattgtgtgctgatgccgaacaccgcccgtggtggtggcatttcgcgc
aagatcaccaatgccgcagaccgcaagaaactcaaagagatagctaatgaaattgaagtg
cctcagggggctggcctgatcgtgcgcacggccggtgccaagcgcacgaaggctgagatc
aagcgcgattacgaatatctgcagcggctctgggagcagatccgcgagctgacgctgaaa
tccatcgcacccgcaaagatctatgaggaaggcgacctgatcaagcgctcgatccgcgat
ttgtataaccgcgatatcgatgaggtctttgttgagggcgagcgtggttaccgcattgcc
aaggacttcatgaaaatgatcatgccgtcccacgccaaaaacgtgaaactctacgccgaa
ggtctgccgcttttcgcgcgctatcaggtcgaaagctatctggcctcgatgttcaacccg
acggttcagctgccttcgggcggctatatcgtgatcggtgtgacagaagcgctggtggcc
atcgacgtgaactccggccgcgcgaccaaagaaggctcgattgagcagaccgcgaccaag
accaacctcgaggccgccgaagaagtggcccgtcagctgcgtctgcgcgaccttgccggt
ctgattgtaatcgacttcatcgacatggacgagcgcaagaacaacgccgccgttgaaaag
cgcatgaaggacaagctcaaaaccgaccgtgcgcgtattcaggtgggccgtatttcgggt
ttcggtctgatggagatgtcccgccagcgtctgcgtcctggcatgatcgaggctaccacg
cagccctgtcacgcctgccacggcacggggctgatccggtctgatgataatctcgcgctg
tcgatcatccggcagatcgaagaggaaggtacccgtaaacggtcccgtgaagtgctggtc
aaagcccccgtgggcattgcgaacttcctgatgaaccataaacgcgagcacatcgcgcag
atcgagggccgctatggcctgtcagtgcgcatcgaaggggatccgacgcttgtaagcccg
gatttcagccttgagaaattcaagactgcgacccgcgtagtgcgcgccgtcgagcatgtc
gtttctgtcgatacatccctgatggatgagatcgacgcaggcgaggatgaggttgaagcc
gtcgcggacgaggcgccggctgcgcccggtgccgccgcccctcagaatgacggtgaccgg
gacggagacggagacggtgagggcaaacccaagcgtcgccgccggcgtcgtcgccggagc
cgcagcaagaacagcaacggcgagcatcagaacggtgaaaaccacaacggtgcgcagccg
aacgcggaagacagcgattccgccgggaatgaaaaagccggtgaaaccgccgcagctgct
gcagacagcagttcggatgaagtgaatgcatccggtgctgaaactgcggatgcggaggaa
aagccgtcaaagccgaaaacgcgcagccgaacgcgcaagccaaaggcggagcctgaagca
gccccggctgacgaaacccgggccgatgcgcctgcgcctgacgcagaagcggcagagcct
gaggccaaaccgaaaacgccccgcaagcgcgcaagtcgtgccaaaaccgcgaaagcgtcg
gacagcacggcggaaaacacgccggcagtaaacggggccgatcaggatgcggcagcggcg
gacgccgtcgcggatgcgcctgcgaagcccgctgagacaccggctcaggaaatgccggag
cctgtcgcagaaactgccgaaccggctgcacaaacgcctgcacctgagcctgaggccgca
gaaccggtcgcagatgcgccagagaaggcgtcaaagcccaagcgcaaaggctggtggtcg
ctgggcggctga
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