Roseobacter ponti: G3256_07975
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Entry
G3256_07975 CDS
T06561
Name
(GenBank) TM0106 family RecB-like putative nuclease
Organism
rpon
Roseobacter ponti
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_12
RNase_H_2
AAA_11
AAA_30
NAT10_TcmA_helicase
AAA_19
PDDEXK_1
Viral_helicase1
SLFN-g3_helicase
AAA_22
MeaB
AAA_16
ResIII
DEAD
UvrD_C_2
nSTAND_NTPase5
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
QJF51101
UniProt:
A0A858SUB1
LinkDB
All DBs
Position
1661066..1664518
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AA seq
1150 aa
AA seq
DB search
MRKHVDQIVLSASDLVGYLNCGHLTELDLQVAEGALAKPKHWDPLLEILRERGDQHEKAF
IAHLEAQGLISVRIYGVDITPAAVAETRAAMEAGAQIIVQAALAHDKWVGRADILRRVEK
PSNLGSRSYEIIDTKLARETKAGSVLQLCLYADLLEQVQGIAPEYVYVVAPWSDFEPQAF
RYADYAAYFRKAKAAAEAATSEGAPGGQYPEPKEHCDICRWRNQCDARRRADDHLCLVAG
ISKNQTAELQENGITTAAELAAMPTPMPWKPKKGSPLSYEKAREQARIQMESREAGEVRY
ELLPIVEDIGLCLLPEPSDGDIFFDIESDAFVGEHGLEYLFGYIYRDENGAWTCTADWAF
ERKGEKAIFERFVDFVNERREQYPDLHIYHYAPYEPGALKRLMGRYATREGEIDDFLRSN
LLVDLYSVVRNGVRAGVESYSIKKLEPIYGFERDTSLPDANVALARLQAGLELGDIDAID
GEVRATVQSYNYDDCASTIALRDWLEDRRQELVDAGTEVPRPLPSDQEPSEALTERQEAV
QALIERLTADVPADIEERSEEQHAHWILANILDWHRREDKAAWWEYFRLSALTPEELVDE
RTALSQLVFVGDVSPQGARTPVHRYAFPQQDTDIRGDEELRMNSGDKIGSVVAVSADDRT
VDIKKMGKTADIHPEGVFAHQMFNTKEQANSLMRLGEYVADHGIEGDGPYQSARALLLRL
KPELGNGPIRQPDETTLQAALRVARELGEGVFPIQGPPGTGKSYTGARMICELVKRGKKV
GITANSHKVIRNLLDKVVEAAPEMKVDLCCVQKPKFGETEPDQERLKFVTGNAGVYAALG
SGSAQVAGATHFLWSRADAHEVLDVLVIDEAAQMSLANVLAVAQSAKALILLGDPQQLDQ
PTQGTHPDGTGVSALEHVLGGAHTIAEDRGLFLEETWRLHPDICQFNSELFYDDKLHSVE
GCELQEIRCAGSLSGTGLRYVPVEHSGNQSSSIEEAEAVAGLVKEVLSGQPTWTDREGQE
RPLTLEDILIIAPYNAQVFEIQQRLPGARVGTVDKFQGQEAPIAIYSMATSSHADAPRGM
DFLYSSNRFNVAISRAKCVVVLFASAKVFEAECRTPRQMQLANAFCRYLEFADTIADRGR
SNECGAKGNK
NT seq
3453 nt
NT seq
+upstream
nt +downstream
nt
atgagaaagcatgttgaccagatcgtcctgagcgcatccgacctcgtcggctatctgaac
tgtggccacttgacggaactggatttgcaggttgccgaaggggcacttgcgaagccaaag
cactgggacccgcttctcgagatcttgcgtgagcggggtgaccagcatgaaaaggccttc
atcgctcaccttgaggctcagggcctgatatctgtccggatctacggggtcgacatcacg
ccggcggccgtcgccgagacccgggccgcgatggaggctggcgctcagatcatcgtccag
gcggcgcttgcacatgacaagtgggtcgggcgggccgacatcctgcggcgggtcgagaaa
cctagcaatctcggatctcggtcctacgagatcatcgacacgaaacttgcccgcgaaacc
aaggctggttctgttcttcagctttgcctttacgccgacctcttggaacaggtgcagggg
atcgcgcctgaatatgtgtacgtcgtagcgccctggtccgacttcgaaccgcaagcgttt
cgatatgcggactacgccgcgtatttccggaaggccaaggccgccgcggaagcggcgact
tccgaaggagcgccgggcggtcagtatcctgagccgaaggagcattgcgacatctgcagg
tggcggaatcagtgcgacgcacgccgccgtgcagatgaccatctctgcctggtcgccggg
atcagcaagaaccagactgccgagcttcaggaaaacgggatcacgaccgcggcagagctt
gccgcgatgcccacaccgatgccctggaagcctaagaaggggtcaccgctatcctacgag
aaggcacgtgagcaggcccgcattcagatggagtctcgtgaagccggagaggtcaggtac
gagctcctgccgatcgtcgaagatatcggcctgtgcctgctgcctgaaccgtctgacgga
gacatcttcttcgacatcgaaagcgatgcgtttgttggtgagcacggcctcgagtatctc
ttcggctacatctatcgcgatgaaaacggcgcctggacctgcacggcagactgggcgttc
gaacgaaagggcgaaaaggccatctttgagcgctttgtggacttcgtgaacgagcgcaga
gaacagtatccggatctgcacatctaccattacgcaccttacgaacccggggcgctgaaa
cggttgatgggccggtacgcgactcgcgaaggcgagattgatgatttcctgcgcagcaat
ctgttggtcgatctctacagcgtcgtgcgcaatggtgtgcgcgctggcgtcgaaagctac
tcgatcaagaagttggagccgatctatggctttgagcgggacaccagtctgccagatgcc
aacgtcgcgcttgcgcgtctgcaagccggactcgagctaggcgatatcgatgccatcgac
ggcgaggtgcgcgcgaccgttcagtcctacaactacgatgactgcgcctcgaccattgct
ctgcgcgactggcttgaagatcgccggcaggagcttgtcgatgccggaaccgaagttccg
cgtccattgccgtccgaccaggagccaagcgaggcgctgacggaacgccaggaagcagtg
caggctctgatcgagcgcctcacagccgacgtgcctgcggatatcgaagagcggagcgaa
gagcagcacgcgcactggatcctcgcgaatatccttgactggcatcgtcgcgaggacaag
gccgcctggtgggaatacttccgtctctccgcgctgacgccagaagaactcgtcgatgag
cgcactgcgctgtctcagctggtgtttgtcggggacgtatcgccacaaggcgcaaggaca
ccggttcaccggtatgcgttcccacagcaggacacggatatccgcggtgacgaagaactg
cggatgaatagcggcgacaagatcggcagcgttgtcgcggtttctgcggatgaccggacg
gtcgacatcaagaagatggggaagacggctgacatccatcccgagggcgttttcgcgcat
cagatgtttaatacgaaggaacaagccaacagcctgatgcggctgggggagtatgtcgcc
gatcacggcatcgaaggggatgggccttatcagagcgcacgggcactcttgctgcgcctt
aagccagagcttggcaatggaccgatccggcagccggatgaaacgaccctgcaggctgcg
cttcgtgtcgctcgcgagcttggtgaaggcgtattcccgatccagggccctccgggaacg
ggaaagtcgtacaccggcgcccgcatgatctgtgaactcgtcaagcgtggaaagaaggtc
gggatcacggccaacagtcacaaggtgatccgcaacctgctggacaaggtcgtcgaagcc
gcccccgagatgaaggtcgatctgtgctgtgttcagaaaccgaagttcggggagacggaa
cccgatcaggaaaggctgaagttcgtgaccggcaatgccggtgtttatgccgcgttgggc
tcaggatcagcgcaggttgccggtgcgacgcacttcctttggtcacgcgctgacgcacat
gaagtgctcgatgtgctcgtgatcgatgaagccgcgcaaatgtcgctggcgaacgtcctt
gcggttgcccagagcgcgaaggccctgatactgcttggggatccgcaacagctggaccaa
cccacgcagggcacgcatccggacggcacaggcgtatccgcgctcgagcatgttcttggc
ggcgcccatacaatcgccgaagataggggcctattcctggaggaaacctggcgcctgcat
cctgatatctgtcagttcaattctgagcttttctatgacgacaagctgcattcagtagaa
ggatgcgagctgcaggaaatccgctgcgccgggtccctgagcggcacaggtcttcggtac
gtgccggtcgagcattcgggcaatcaaagctcttcgattgaggaggccgaggctgttgcc
ggacttgttaaagaagtattgtccggtcagccgacatggactgatcgagaaggtcaggag
aggcccctgacgctcgaagacattctgatcatcgcgccttacaacgcgcaggtatttgag
attcagcagcggttgccgggcgcccgtgtcgggaccgtagataagttccagggccaggag
gcacccatagcgatctactcgatggcgacatcgagccatgctgacgcaccgcggggcatg
gatttcctatacagttcaaaccggttcaacgtagcgatctcgcgggcgaaatgcgtcgtc
gtactttttgcgtcggcaaaagtattcgaagcggaatgccggacgccgcggcaaatgcag
ctcgcgaatgcattttgcagatatttagagtttgctgatacgatcgcagaccgaggacgt
tcaaatgaatgcggtgccaaagggaacaaatga
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