KEGG   Roseobacter ponti: G3256_10060
Entry
G3256_10060       CDS       T06561                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
rpon  Roseobacter ponti
Pathway
rpon00010  Glycolysis / Gluconeogenesis
rpon00020  Citrate cycle (TCA cycle)
rpon00260  Glycine, serine and threonine metabolism
rpon00280  Valine, leucine and isoleucine degradation
rpon00310  Lysine degradation
rpon00380  Tryptophan metabolism
rpon00620  Pyruvate metabolism
rpon00630  Glyoxylate and dicarboxylate metabolism
rpon00640  Propanoate metabolism
rpon00670  One carbon pool by folate
rpon00785  Lipoic acid metabolism
rpon01100  Metabolic pathways
rpon01110  Biosynthesis of secondary metabolites
rpon01120  Microbial metabolism in diverse environments
rpon01200  Carbon metabolism
rpon01210  2-Oxocarboxylic acid metabolism
rpon01240  Biosynthesis of cofactors
Module
rpon_M00009  Citrate cycle (TCA cycle, Krebs cycle)
rpon_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
rpon_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
rpon_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:rpon00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    G3256_10060 (lpdA)
   00020 Citrate cycle (TCA cycle)
    G3256_10060 (lpdA)
   00620 Pyruvate metabolism
    G3256_10060 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    G3256_10060 (lpdA)
   00640 Propanoate metabolism
    G3256_10060 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    G3256_10060 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    G3256_10060 (lpdA)
   00310 Lysine degradation
    G3256_10060 (lpdA)
   00380 Tryptophan metabolism
    G3256_10060 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    G3256_10060 (lpdA)
   00670 One carbon pool by folate
    G3256_10060 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rpon04147]
    G3256_10060 (lpdA)
Enzymes [BR:rpon01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     G3256_10060 (lpdA)
Exosome [BR:rpon04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   G3256_10060 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 FAD_binding_2 FAD_oxidored NAD_binding_8 HI0933_like GIDA FAD_binding_3 Lys_Orn_oxgnase DAO AlaDh_PNT_C 2-Hacid_dh_C Thi4 3HCDH_N
Other DBs
NCBI-ProteinID: QJF51480
UniProt: A0A858ST26
LinkDB
Position
complement(2105656..2107050)
AA seq 464 aa
MAAKSFDLIVIGAGPGGYVAAIRGAQLGMSVAIIEREHLGGICLNWGCIPTKAMLRSSEV
FHLMHRAKEFGLKADNVGYDLDAVVKRSRQVAGQLSGGIGHLMKKNKVTVFMGEATIPAK
GKVSVKTDKATEELTAKNIVLATGARARELPGLEADGDLVWTYKHALQPKHMPKKLLVIG
SGAIGIEFASFYNTLGADTTVVEVMDRVLPVEDAEISAFAKKSFEKQGMKIMQKAMVKQL
DRAKGKVTAHIEVGGKVEKHEFDTVISAVGIVGNTEGLGLEELGVKVDRTHVVTDEFCRT
GVEGLYAIGDIAGAPWLAHKASHEGVMVADLIAGRHAHPVKPETIAGCTYCHPQVASVGY
TEAKAKELGYEIRVGRFPFIGNGKAIALGEQEGMIKTIFDAKTGELLGAHMVGAEVTELI
QGYVVGRQLETTEEDLMNTVFPHPTLSEMMHESVLDAYDRVIHM
NT seq 1395 nt   +upstreamnt  +downstreamnt
atggcggcaaaatcctttgatcttatcgtgatcggtgcagggccgggaggctatgttgcg
gccatccgaggcgcgcagctgggcatgtcggttgccatcatcgagcgtgagcatctgggt
ggcatctgcctcaactggggctgtatcccgacaaaggctatgctgcgctcctccgaggtc
ttccatctgatgcaccgggcaaaggaattcggcctgaaagctgacaacgtgggctatgat
ctcgacgctgtggtcaaacggtcccgccaggtcgcagggcagctttcgggcggtatcgga
catctgatgaaaaagaacaaagtcaccgtctttatgggcgaggcgaccatccccgccaaa
ggcaaggtctcggtgaaaactgacaaggccaccgaagagctgacagcaaaaaatattgtg
cttgctaccggggcccgggcgcgcgaactgccggggcttgaagctgacggtgacctggtg
tggacctacaaacacgcgctgcaacccaaacacatgcccaaaaagctgctggtgatcggt
tccggcgccatcggcatcgaatttgcgagcttttacaacacactcggagccgacacgact
gttgtagaggtgatggaccgcgtactaccagtcgaagatgccgagatctccgcctttgcg
aaaaagtcgtttgagaagcagggtatgaagatcatgcagaaggcgatggtgaaacagctt
gatcgcgccaaaggcaaagtgaccgcgcatatcgaagttggcggcaaggtcgagaaacac
gagtttgacaccgtgatctccgcggtgggcatcgtcgggaataccgaaggtctggggctt
gaagaactcggcgttaaagttgaccggacgcatgtcgtgacggatgaattctgccgcacc
ggcgtcgaggggctgtacgccatcggtgacatcgccggtgcgccctggctggcccataaa
gccagccacgaaggcgtcatggtcgctgatctgattgccggcagacatgcgcatcccgtc
aagcccgagaccatcgcgggctgcacctactgccatccgcaggttgcctccgtaggctat
accgaagcgaaagccaaagagctgggttatgagatcagggtcggacgctttccgttcatc
ggcaatggcaaagccatcgctctgggcgaacaggaaggcatgatcaaaaccatctttgac
gcgaaaaccggcgaactgctgggtgcgcacatggtgggtgccgaagtcacggaactgatc
cagggctatgtggtcgggcgacagcttgagaccactgaagaggacctgatgaataccgtc
ttcccgcatccgacgctgagcgaaatgatgcacgaaagcgtgctcgacgcctacgaccgg
gtcattcacatgtag

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