Roseobacter ponti: G3256_12395
Help
Entry
G3256_12395 CDS
T06561
Name
(GenBank) GAF domain-containing protein
Organism
rpon
Roseobacter ponti
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GAF
GAF_2
GAF_3
Response_reg
HATPase_c
DUF3369
HisKA
Motif
Other DBs
NCBI-ProteinID:
QJF51908
UniProt:
A0A858SV88
LinkDB
All DBs
Position
complement(2619669..2626637)
Genome browser
AA seq
2322 aa
AA seq
DB search
MIARPGHPAGTGDAEHVAQPELTAEQELDTLRREKADAEARLAATAEILQSVKTSRGDAQ
PVFEAVVRSATELSRANFCILWRYDGRMIHLCASDGFTDEFMETYSAGYPSEPVPDSMTE
GVIRTGATFHLKNAQSDSYFDVNTAKEYGFKYMLGLPVETDEGLWGIMVLAWPGDEAPDP
AIVNLLESFTDQAAIAIENARLFASTEEAMQREAASSEILEVISGATSDIQAVFDLIAQK
AADLCDAPFCAVWQFVSSEVVELRAYHGHSDAQIERNKERWQSPLPEGSINKTVLDTGRR
FLLEDAQVESYTDHMIAREMGYRQSIGVPVFNGDEIWGTIVLSFPEDRPSRQADIDMVET
FADQAGIAIENARLFDETQTSLARQTANADILRVISSSPTDVQPVFDVVVSTAARLMGCS
NAIVHLTEGGEYWSAAVADETGEVVTAKVWGNIRESASRFAPDGRPMFPLDPEVNLPSRA
IVSGEMLHIPDWSEADLPPQAKKRSREMQVGSSLFLPLMRGGQCLGLLTLVHKDANAFSD
GDIALASSFRDQAMIALENTRQFMETREALEQQTATAEVLKVISQSAFDLPTVLQALIDT
AARLCDASVCILFNRVGDELHLGANTGCSPDMVTFHTKNPLTLDRTNIAGRAVLDRTTIH
VPDITEDPEFDTPKSVELGNWRSIIAVPLIREGEVIAVLDLARPMPGPFTPRQIELVETF
ADQAVIAINNAHLFSEVQARTAEVTESLEYQTATSEVLSVISRSPNELAPVLEAILEVSV
RLCSPEVAYVTLLNPETGVYEIVATHNASGKFLQVLSEQSFTPRKGTCTGRVALTGETVY
IPDIETDPEYDWNKEAKVGGFCSTAGVPLKKNGQVIGTITLAHVRKAAFSDRQITLLETF
AAQAVIAISNARLFSELQNRTAEVSEALVREKASAEVLQVINEATSDLQPVFDLIARKSK
ELCGARFCVVDRFEGQSLEFCAQHGFSEETLPDIMAAYPVTDTEGHVSRAVLDSGAVVHV
EDAQAGGPGGYYAPEVAKKTGYRRLLGVPIRVDGEIWGAITLAWPDLSQPQTGHVELVRA
FASQASIAIANVRLLRETQAALARQTASAEVLRAISASPTDTKPVFEEIVRLATGLVSCD
LAIIVESDGREFWQVAVATPAGVEKDITKSRAAIDPEDNLPSQTMLSKKTTHIPDWSKYD
LPARDRKIGEKNGFMASLGLPLIRAGKCLGSLALIRKAPGAFSADDIAIAESFADQAVIA
IENVRLFRETQAALVRQTASADILRVISGAQTDVTPVFEAIVKAALPVMDCDGATVMICE
GEYFRPRAGMWQDGLMQELGKNRVKIDPERNFPSRAIVNRAPVHIPDWNAIDLPEDEIGV
QEKFNMNACLFQPLVHGSACLGVIAFARNEAKEFSSEEIGLAETFCSQAVIAIRNAQMFD
DTQTALSRQTASADILRVISETQSDLAPVFEAILSRAAQLCDAPMASMNLVNETRSHADL
VAHWGDNLDALEVGKTQWPMVPGLSIADSILERKPIHFHDLKDTDAYRNGEEIRRMSVDK
EGIRTFLTIPLVHNNVGLGNLALYKREVKPFSDEDIALLESFADQAVIAIRNAKIFEENQ
TALARQTASVDVLRVISSSPNDVTPVFDEIVQAAVRLIACDRAVVLRADDKELWQAAVAD
TEGLKKDFSTERHRIDPEDNLPSRALLAREIQHIPDWTTADLPEKDVRIQKESGYHSSLI
VPLLRGDEAVGMLSFIRMEKRAFSRDEIALAQSFGDQAVIAIENVRLFQEAEDARAAAEA
ANEAKSAFLATMSHEIRTPMNAVIGMSGLLMDTDLNDEQADYARTIRDSGDALLGIINEI
LDFSKIEAGQMDIEKHPFDLRECVESALDLVAGRAAEKHLDVAYILDESVPAAISTDLTR
LRQILLNLLSNAVKFTHSGEVVVSVTASGAQPDLPVELTFEVRDTGIGLTEKGMSRLFQS
FSQADSSTTRKYGGTGLGLAISKRLAELMGGTMEATSEGEGKGSVFRFTILADRAQLPGN
KARRLSGTQAELEGKRLLVVDDNATNLKILSLQTGKWGTQTRAVKHPDLALRTLKDGAFD
LAILDMHMPEMDGLELARRMRKMRPGMPLVLFSSLGLRDVETEEALFDAYLAKPLRQSHL
FDTLITLLTPKETVITRKQEDRKPVTDPEMAARHPLRILLAEDNLVNQKLAIRLLEQMGY
RADLASNGVEALQSVARQTYDVVLMDVQMPEMDGLEAARRITAEAARDARPRIIAMTANA
MQGDREMCLEAGMDDYIAKPIRVDRLITALMDVPQRDRKSHD
NT seq
6969 nt
NT seq
+upstream
nt +downstream
nt
atgatcgcccgcccgggacacccggcgggcaccggggatgcagaacacgtggcgcaacca
gagctgaccgcagaacaggaactcgacacgctgcgccgtgagaaggcggatgcagaggcc
cgtctcgcggccactgctgagatcctgcagtccgtcaagacttcccgcggcgatgcgcag
ccggtatttgaagccgttgtccgcagcgcaaccgagctcagtcgcgcgaatttctgtatt
ctctggcggtatgacgggcggatgatccatctgtgtgcaagcgatggattcacggatgaa
ttcatggagacttacagtgccggctatccgtcggagccggttcccgattcaatgaccgaa
ggcgtgatcaggaccggggccactttccatctgaaaaatgcacagtccgacagctacttc
gatgtgaatacggcgaaggaatatggtttcaagtacatgcttggcctgccggttgagacc
gatgaggggctctggggtataatggtgctcgcctggcccggcgacgaagcgccggacccc
gccattgtgaacctgctggaaagtttcacggatcaggcggcgatcgcgattgaaaacgcc
cgtcttttcgccagcaccgaagaggccatgcagcgcgaggccgccagctctgaaatcctt
gaagtgatcagtggcgccacttctgatattcaggcggtgttcgaccttattgctcagaaa
gcggctgatctctgcgatgcgccattctgtgcggtctggcagtttgtcagcagcgaagtt
gttgaactgcgggcctatcacggacacagcgacgcgcagatcgagcgcaataaggaacgc
tggcagtcgcccctgccggaagggtcaatcaacaaaaccgtgctggatacaggccggcgg
ttcctgctcgaagatgcccaggtcgaaagctacaccgaccatatgattgcacgcgaaatg
gggtaccgccagagcatcggcgtgccggtttttaatggtgacgagatctggggcacgatc
gttctgtccttccccgaagaccgtccctcacgccaggccgacatcgacatggtcgaaacc
tttgccgatcaggccggcatcgccattgagaacgcgcgtctttttgatgagacgcagacg
agcctcgcgcggcagacagcgaatgcggatattctcagagttatcagcagctcacccacc
gatgttcaacctgtatttgatgtggttgtcagcaccgcggcgcggctgatgggatgcagc
aacgccatcgtgcacctgaccgaaggtggcgaatactggtccgcggcggtcgccgatgag
acgggcgaagtggttaccgcaaaagtctggggaaatatccgcgagtccgccagccggttt
gctcccgacgggcgccccatgttcccgcttgatccggaggtgaacctgccctcgcgcgcg
attgtgtcgggcgaaatgctgcatattccggactggtcggaggctgatctgccccctcag
gcgaaaaaacgcagcagggaaatgcaggtcggatcctcgctctttctgccgctgatgcgc
ggcgggcaatgccttgggttgctgacactggtacacaaagacgcaaacgccttttcagac
ggcgatatcgcgctggcgtcttctttccgcgatcaggcgatgattgcgctggagaacacc
cgtcagtttatggaaacgcgcgaagcactggagcagcagaccgctaccgctgaagtgctt
aaggtcatcagccagtccgctttcgatctgccgaccgtgctgcaggcgctcattgatacg
gcagcaagactgtgtgacgcatcagtctgtattcttttcaaccgtgtgggggatgagctt
caccttggtgccaacaccgggtgctcgcccgacatggtcacctttcacacaaaaaacccg
ctcactctggaccgtaccaacatcgccgggcgcgcggtgctcgaccggaccacgatccat
gtgccggacatcacagaagacccggaattcgacactccgaaatcggttgaactggggaac
tggcgctcgatcatcgcagtgccgcttatccgagagggcgaggtgattgcggtgcttgat
ctggcacgtcccatgcccgggccctttacgccacgtcagatcgaactggtggaaaccttt
gcggatcaggcggtgatcgcgatcaacaacgcgcatcttttcagcgaagtacaggcgcgt
acggcggaagtgaccgaaagcctcgaataccagaccgcgacctccgaggtgctcagcgtt
atttcgcggtcgccgaatgaactggcacctgttctggaggccattcttgaggtctcggtg
cgtctgtgcagcccggaagtggcatatgtcacactgctgaaccctgagactggcgtctac
gaaatcgtggccactcacaatgccagcggcaagtttctgcaggttctctctgagcagagt
ttcacaccacggaagggcacctgcacggggcgtgtcgcactcaccggagagacggtctac
atcccggacatcgaaactgacccggagtatgactggaacaaagaggcaaaggtcggcggc
ttttgttcaacagcgggggttccgctgaaaaaaaacggccaggttattggcacgatcacc
ctggcgcatgtcagaaaggctgccttttcagacaggcagatcacgctgctcgaaacattc
gccgcacaggcggtgatcgcgatcagcaatgcgcggctcttttcggaactgcagaaccgg
accgctgaagtctccgaagcgctggtgcgcgaaaaagccagcgccgaggttctgcaggtc
atcaatgaggccacatctgatctgcagccggtgttcgatctgattgcccgtaagtccaaa
gaactttgcggtgcacggttttgtgttgttgaccggtttgaaggtcagtcgcttgagttt
tgtgcgcagcacggcttttcagaagagacgctgcccgacatcatggcggcctatccggta
acggacacagaggggcacgtgtcgcgcgccgtgctcgacagtggcgccgttgtgcatgtc
gaggacgcccaggcaggtggccctggtggatattatgcacccgaggtcgcgaaaaagacc
ggctaccggcgcttgctcggggtgcccatccgggttgacggtgagatctggggcgccatc
acgctggcctggccggatctgtcgcaaccccagacagggcatgtggaacttgtccgggca
ttcgccagccaggcgagcatcgccatcgcaaatgtgcgcctgctgcgcgagacacaggcg
gcgctggcccgccagacggcgagcgccgaagtgctgcgggcgatcagtgcctcgccgacg
gacacgaagccggttttcgaggaaatcgtgcgcctggccaccggactggtgtcctgtgat
ctggcgattatcgtcgaatccgacggcagggagttctggcaggtggcggttgcaaccccg
gcgggcgttgagaaagacatcacgaaatcgcgcgccgcaatcgaccccgaagacaatctg
ccgtcacagaccatgctgagtaaaaagacgacccacatacctgactggagcaaatacgat
ctgccagcgcgggacaggaaaattggcgaaaaaaacggtttcatggcatcgctcggactg
cccctgatacgcgcagggaagtgtctgggctccctcgcgctgatccgaaaagcacccggc
gcattttcggcagatgacattgccatcgccgagagctttgccgatcaggccgtgatcgcc
atcgaaaacgtgcgcctctttcgcgaaacgcaggcagcgctggtgcgccagaccgccagt
gccgacattctgcgggtgatcagcggcgcgcagaccgacgtgaccccggtgtttgaggcc
atcgtaaaggcggcccttccggtgatggattgcgacggggcgacagtcatgatctgcgaa
ggggaatatttccggccccgggcgggcatgtggcaggacggtctcatgcaggaacttggc
aagaaccgggtaaagatcgatccggaacggaatttcccttcccgcgcaatcgtcaacagg
gcgccggtccatatccctgactggaatgctattgatctgcccgaagatgagatcggcgtt
caggaaaagtttaacatgaacgcctgtctgtttcagccgctggtacatggcagtgcctgt
cttggtgtgattgcctttgcacgcaatgaggcaaaggaattcagttccgaagagattggc
ctcgcggaaaccttctgcagccaggcggtgatcgcgatccgcaatgcgcagatgtttgac
gacacgcagacggccctctccagacagaccgccagtgccgatattctgcgcgtgatcagt
gaaacgcagtcagatctggcacctgtcttcgaggctattctgagccgcgcggcgcagctt
tgtgatgcgccgatggccagtatgaaccttgtcaatgaaacgcgcagccatgcggatctc
gtggcgcactggggcgataaccttgatgcgctggaggtgggtaaaacccagtggccgatg
gtgcccggattgtcgatcgcggacagtattctggagagaaaaccaatccactttcacgac
ctcaaggacaccgatgcgtatcgcaacggtgaagagatacggcggatgtcggtcgacaaa
gaggggatccgcacgttcctgacgataccgctcgtccataacaatgtcggtcttggcaat
cttgctctttataagcgcgaggtgaaacctttcagcgacgaggacatcgccctgctggag
agtttcgccgatcaggctgtgatcgcgatccggaacgcaaagatctttgaggaaaatcag
acggcccttgcgcgccagaccgcgagtgttgatgtgctgcgggtgatcagttcgtcaccc
aatgacgtgacaccggtttttgacgagatcgtacaggccgctgtcaggttgattgcctgt
gacagggcggttgttctgcgggccgatgataaggagctctggcaggcggccgtggcagat
acagaagggctcaaaaaagacttctccaccgagcgtcacaggatcgacccggaggataac
ctgccgtcgcgtgcactgctggcgcgcgagatccagcacattccggactggaccacggca
gatctgccggaaaaggacgtccgtatccaaaaagagagcggttatcattcgtcgctgatt
gtgccgttgttgcggggggatgaggcggtgggcatgctgagttttatccgcatggaaaag
agagctttcagccgcgacgagatagccctggcgcagtccttcggggaccaggccgtgatt
gccatcgaaaacgtgcgcctgttccaggaggccgaagacgcgcgcgccgctgccgaggca
gccaacgaggccaaaagcgcgtttctggccaccatgagccacgagatccggacgcccatg
aacgcagtgattgggatgagcggtctgctgatggacacggacctcaacgatgagcaggcc
gattatgcccgcacaatccgtgacagcggcgatgcgctgctgggcatcatcaatgagatc
ctcgatttttccaaaatcgaagccgggcagatggatatcgagaaacatccctttgacctg
cgcgaatgtgtcgaatccgcgcttgatctggtggcgggacgggcggcagagaaacatctt
gatgttgcttacatcctggatgaaagcgtaccggcggccatcagcactgatcttacgcgc
ttgcgtcagatcctgctcaacctgttgtccaatgcggtaaaattcacccattccggtgag
gtcgtcgtcagcgtgacagcctccggggcgcagcctgaccttcctgttgagctgactttt
gaggtgcgcgacaccggcatcggtctgacggaaaagggaatgagccggcttttccagtcg
ttcagtcaggcggacagttccacgacccgcaaatacggtggcaccggccttggacttgcg
atctcaaaacgcctcgccgaactgatgggcggcacgatggaagccacgagcgaaggcgag
gggaagggctccgtcttccgtttcacgatcctcgcggaccgcgcgcagttacccggcaat
aaggcccgacgtctctccggcacccaggcagagcttgagggcaaacgcctgctggttgtc
gatgacaatgccaccaacctcaaaatcctgtcgctgcagacaggcaaatggggcacgcag
acacgcgctgtgaaacatccggatctggcgctcagaacgctgaaggatggcgcgttcgat
cttgcgatcctggatatgcatatgccggaaatggacgggctggagcttgcgcggcgtatg
cgcaaaatgcgccccggaatgccgctggtgctcttcagctcgctggggctgcgcgacgtg
gagaccgaagaggcgcttttcgacgcctatctggccaaaccgctgcgtcagtcacatctt
tttgacacgctgatcacgctgctgaccccgaaagagaccgtgatcacccgcaagcaagag
gacagaaagcctgtcaccgatcctgagatggcggcgcgtcatccgctgcgcatcctgctg
gccgaggacaatctggtgaaccagaaactggcgattcggctgctggagcagatggggtac
cgcgcggacctggccagcaacggggttgaggcgctgcaaagtgtggcgcgccagacttat
gacgtggtgctgatggatgtgcagatgcccgaaatggacgggcttgaggctgcgcgccgg
atcacggcagaggccgcccgcgatgcgcgccccaggatcatcgcgatgaccgccaatgcc
atgcagggcgaccgcgaaatgtgccttgaggccggcatggacgactatattgccaagccc
atccgggtagacaggctgatcacggcgctgatggacgtgccccagagagacaggaaatcc
catgactga
DBGET
integrated database retrieval system
