Roseibium porphyridii: K1718_00020
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Entry
K1718_00020 CDS
T09906
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
rpop
Roseibium porphyridii
Brite
KEGG Orthology (KO) [BR:
rpop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rpop03032
]
K1718_00020 (gyrB)
03400 DNA repair and recombination proteins [BR:
rpop03400
]
K1718_00020 (gyrB)
Enzymes [BR:
rpop01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
K1718_00020 (gyrB)
DNA replication proteins [BR:
rpop03032
]
Prokaryotic type
DNA Topoisomerases
K1718_00020 (gyrB)
DNA repair and recombination proteins [BR:
rpop03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
K1718_00020 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
GyrB_insert
Toprim_4
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
WFE89785
UniProt:
A0ABY8F2U0
LinkDB
All DBs
Position
4102..6555
Genome browser
AA seq
817 aa
AA seq
DB search
MSDTSTPEPTPNPETENGAEYGADSIKVLKGLDAVRKRPGMYIGDTDDGSGLHHMVYEVV
DNAIDEALAGHADHVTVTLNPDGSVTVSDNGRGIPTDLHPEEGVSAAEVIMTQLHAGGKF
DQNSYKVSGGLHGVGVSVVNALSTKLDLRIWRNDQEHHMTFSHGDAQGPLKVVGPANGRK
GTEVTFLPSPETFSKVEFDFSTLEHRLRELAFLNSGARIILTDKRGVEDVVEELFYEGGL
EAFVRYLDRAKHPLIEEPVTMSAEKDGITVEAAMWWNDSYHEQVLCFTNNIPQRDGGTHL
AGFRAALTRQVTGYAEATGLMKKEKVSLSGDDCREGLTCVLSVKVPDPKFSSQTKDKLVS
SEVRPVVENLISQTLSEWLEENPAPARAIVSKVVEAASAREAARKARELTRRKGALDVAS
LPGKLADCQERDASKAELFLVEGDSAGGSAKQGRHRENQAVLPLRGKILNVERARFDKML
SSNEIGTLITALGTGIGMEEFNIEKLRYHKIIIMTDADVDGAHIRTLLLTFFFRQMPELI
ENGYVYIAQPPLYKVKRGQSEQYLKDQSALEDYLISQGLDDASLSLASGEVRTGQDLQGV
VQTARAISDIFDGLHSRYNRDVVEQAAIAGALNTEILDDRSKAEEAAAYIARRMDILADE
FERGWTGEARDDGSLVFKRTVRGVEEAATIDAALLGSADARRLAAHADHLHEVYGKAATL
RRKDNSMDIRGPRALLTQVYAFGQKGISLQRYKGLGEMNPEQLWETTLDPNVRSLLQVKV
KEADDADDIFTKLMGDEVEPRREFIQDNALAVANLDI
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacacgtccacgcctgagcctaccccgaacccggaaacagaaaacggtgccgaa
tatggcgctgacagcatcaaggttctcaagggcctcgatgccgtccgcaaacggcccgga
atgtatatcggtgacacggacgatggctccggtctgcaccacatggtctatgaggtggtc
gacaatgccatcgacgaggctttggccggtcatgcagatcatgtcacagtcacgctcaat
ccggacggttcggtgaccgtttccgacaacgggcgcggcattccaacggacctgcatcct
gaagaaggtgtttcagcggctgaagtcatcatgacccagctacatgccggcggtaaattc
gaccagaattcctacaaggtttccggcggtctgcacggcgttggcgtttccgtggtgaat
gctctttcgaccaagcttgatcttcgcatctggcgaaatgatcaggagcaccacatgacc
ttctctcacggagatgctcaagggccgctcaaggtcgtcggtcctgccaatggtcggaaa
ggcaccgaagttacattcctgccttcgccggaaaccttcagcaaggttgaattcgatttc
agcactctggagcatcgtctgcgcgaactggcattcctgaattccggtgcccgcatcatc
ctgaccgacaaacgcggtgtagaggatgtcgtcgaggagctgttttacgaaggcggactt
gaagccttcgtccgttatctggaccgggcaaagcaccccctaatcgaagagcctgtcacc
atgagcgcggaaaaggacggcattaccgtcgaagccgcaatgtggtggaacgacagttat
cacgaacaggttttgtgcttcacgaacaacatcccgcagcgcgacggcggtacgcacctt
gccggtttccgcgctgctctgacgcgtcaagtaaccggttatgccgaagcgacagggctt
atgaaaaaggaaaaggtctcgctgtccggcgatgactgccgcgaaggcctgacttgcgtt
ttgtcggtcaaagtgccggatccgaaattctcgtcacaaaccaaggacaagctcgtttcg
tccgaggtgcggccggttgttgagaacctgatttcccagacgctgagcgaatggcttgaa
gaaaatccggctccggccagggcgatcgtttccaaggtggtcgaggctgcctctgcacgc
gaggctgccagaaaagcccgcgagttgacccgccgcaagggcgcgctcgacgtcgcctca
ctgcctggaaagctggcggactgccaagagcgcgatgcgtctaaggccgaactcttcctg
gtggagggtgattctgcgggtggctcggcaaagcagggccgccaccgggagaaccaggcc
gtcctgccgttgcgaggcaagatcctcaacgtggagcgggcgcgctttgacaagatgctg
tcgtccaatgaaatcggcacgctgatcaccgcactcggcaccggtatcggcatggaagaa
ttcaatatcgagaaactgcggtatcacaagatcatcatcatgacagatgcggatgtggat
ggtgcccacatcaggacattgcttttgacgttcttcttccgccagatgccggagctgatc
gaaaacggttatgtctatatcgcgcagccgccgctttataaggtcaagcgcggccagtcc
gaacagtatctgaaagaccagagtgctctggaagactatttgatttcacaggggctcgac
gatgcctcgctgtcgctcgccagtggagaagtgcgaacgggccaggatcttcagggtgtc
gtccagaccgcacgtgcaatctccgacattttcgacggattgcactctcgctacaatcgc
gatgtcgttgaacaggcggccatcgccggcgcgctcaacaccgaaatattggacgaccgc
agcaaggcggaagaggcggcagcttatatcgcccgccgtatggacattctcgcagacgag
ttcgaacgcggctggacaggcgaggcccgtgatgacggcagccttgtcttcaaacgcacc
gtgcgcggcgtcgaagaagcagccacaatcgatgccgccctgctcggatcggcagatgcc
cgccgtcttgcggcgcatgccgaccatctgcacgaggtctacggcaaggcggcaacgctg
cgccgcaaagacaactcaatggatatcagagggccacgcgcactgctgacacaagtctat
gccttcggtcagaaagggatttcccttcagcgctataagggcctcggtgagatgaacccc
gagcaactttgggaaacaaccctcgacccgaacgtccgatcccttcttcaggtcaaggtt
aaggaagccgatgatgcggacgatatcttcaccaagctcatgggagacgaagtggagcca
agacgcgagttcatccaggacaacgcactggccgttgccaatctcgacatctag
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