Roseibium porphyridii: K1718_01110
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Entry
K1718_01110 CDS
T09906
Name
(GenBank) LacI family DNA-binding transcriptional regulator
KO
K05499
LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
Organism
rpop
Roseibium porphyridii
Brite
KEGG Orthology (KO) [BR:
rpop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rpop03000
]
K1718_01110
Transcription factors [BR:
rpop03000
]
Prokaryotic type
Helix-turn-helix
LacI family
K1718_01110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
HTH_IclR
HTH_26
HTH_24
Sigma54_DBD
TetR_N
MarR
HTH_Crp_2
HTH_3
HTH_7
MerR
Motif
Other DBs
NCBI-ProteinID:
WFE89981
LinkDB
All DBs
Position
complement(241488..242516)
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AA seq
342 aa
AA seq
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MAQKPIRIRDVAKRAGVSTATVSRALSNPELLTEATRETVFRAIRSTGYRVNRAARNLRT
RQAGAVLVLVPNLGNPFFSQILAGISEIFGESDLSVLIADTKDHATAGKRVVDYFLDSQI
DGMICLDGALSDEEIRQFEENGVNGRIVFACEWKHGSSLPSVRSDNNQGARLAVRHLYEL
GHRKIAHVTGPQDNVLTHVRREGMLAERAELGLPVRDEWIIRGDFSLESGRSAAERVLSM
EDRPTAIFCASDQVAFGLISTLRMHGMKVPEDVSVVGFDDIELSEFYVPALTTVRQDRHA
LGTSAARLLLECIHADGAISNKHSGPVMIDVNLVVRQSAASI
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
ttggcgcagaagcccatcagaattcgagatgttgccaaaagggccggagtttcaacggca
acggtcagtcgagcactcagcaatcccgagcttttgacggaggcgacgcgggaaacagtt
ttcagggccattcgctccaccggttaccgcgtcaatcgggccgcaaggaacctgcgaacg
cgtcaggccggggcggttcttgttctggttcccaacctcggaaacccgtttttttcgcaa
atactagccggtatcagcgaaattttcggcgaaagcgatctttctgttttgattgccgac
acgaaagatcatgcaacggcgggaaagcgcgtcgtcgactattttctagattctcagatt
gatggcatgatttgcctggatggcgcgctgtcagacgaggaaattcggcagttcgaagaa
aacggagtgaacggcaggattgtgtttgcgtgtgaatggaagcacggaagctctctgccg
tcggtacgaagcgacaacaaccagggtgccaggttggcggtcaggcacctttatgagcta
gggcatcggaaaatcgcgcatgttaccggcccccaggacaatgttctgacgcatgtccgg
cgagagggcatgctggcagaaagagctgaactcggcttgccggtgcgggatgaatggatc
attcggggcgacttttctcttgagtcaggccggtcggcggcggaaagggtcctgtctatg
gaagacaggcctacggccatattctgtgcctcggatcaggtcgccttcggattgatttca
acacttaggatgcacggcatgaaagtgccggaagacgtatccgtcgtcgggtttgatgat
atcgaactttcagagttctatgttcctgcactgaccacggtcaggcaggatcggcatgct
ttgggaaccagtgccgccagattgctcctggagtgtattcacgcagacggtgcaatctcc
aataaacactctggacccgtcatgatcgacgtgaaccttgtcgttcgtcaaagtgcagcc
agtatttag
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