Roseibium porphyridii: K1718_01750
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Entry
K1718_01750 CDS
T09906
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
rpop
Roseibium porphyridii
Pathway
rpop03030
DNA replication
rpop03410
Base excision repair
rpop03420
Nucleotide excision repair
rpop03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rpop00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
K1718_01750 (polA)
03410 Base excision repair
K1718_01750 (polA)
03420 Nucleotide excision repair
K1718_01750 (polA)
03440 Homologous recombination
K1718_01750 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rpop03032
]
K1718_01750 (polA)
03400 DNA repair and recombination proteins [BR:
rpop03400
]
K1718_01750 (polA)
Enzymes [BR:
rpop01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
K1718_01750 (polA)
DNA replication proteins [BR:
rpop03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
K1718_01750 (polA)
DNA repair and recombination proteins [BR:
rpop03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
K1718_01750 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
K1718_01750 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
HHH_5
Motif
Other DBs
NCBI-ProteinID:
WFE90098
LinkDB
All DBs
Position
complement(367211..370183)
Genome browser
AA seq
990 aa
AA seq
DB search
MIRAMSTQSSSPALTADDHLILVDGSTFIFRAYHALPPLTRKPDGLPVGAVSGFCNMLWK
LLQEGLTPEEGDEPTHFAVIFDHSAQTFRNEIYPEYKAHRPEPPEDLVPQFGLIREATRA
FSVHCIEQAGFEADDLIATYARQAAEQGAQVTIVSGDKDLMQLIGPKVGMIDTMKNKIFG
ETEVFEKFGVGPDKVIEVQSLAGDSVDNVPGVPGIGLKTAALLINEFGDLETLLSQADTI
KQKKRRENLIEFADQARVSKELVTLKQDVPVETPVGNLSVTDMDGPKAVGFLKAMGFNTL
TKRVAETTGADIANVEASEFEVPGWDVPDHKGRMAERVETSSGAATSDGTPGVEGMMVPQ
TVADARAESVKAIAIDSSAYETVTSVDRLKEWCEAAFEKGYVAFDTETTSLNAMQADLVG
LSLSTEPGKACYVPLAHVDGEGDLLGGGGLLPDQIPLQDALDVLKPMLEDASVLKIAQNL
KYDWLVMTRYGVDIGPFDDTMLLSYTVDAGKGGNGMDELSDRWLDHKPIPFKEVCGSGKS
MITFDKVAIDKATAYAAEDADVTLRLWMVLKPRLVSDRMATVYETLERPMVPVLARMEKR
GISVDRQMLSRLSGDFAQGMAAQESEIYELAGETFNIGSPKQLGDILFGKMGLPGGKKTK
TGAWSTSAQVLEDLAAEGHELPSKIVAWRQLSKLKSTYSDALPGYINPETKRVHTSYALA
STTTGRLSSSEPNLQNIPVRTEAGRKIRQAFVSEAGHKLVSADYSQIELRVLAHIADIPQ
LKKAFEDGLDIHAMTASEMFGTPIEGMDPMVRRQAKAINFGIIYGISAFGLANQLGISRG
EAGDYIKTYFERFPGIKDYMEATKKKVHADGFVSTIFGRKAHYPEVNTKNPNMRAFYERA
AINAPIQGSAADILRRAMVRMEDRLNSAKLDAQMLLQVHDELIFEVPDAQVDETIPVIKD
VMENACDPALTLSIPLQVDARAADNWDDAH
NT seq
2973 nt
NT seq
+upstream
nt +downstream
nt
atgatccgcgccatgtcgacgcaaagctcttcccctgccctcaccgctgacgaccacctg
attctggtcgatggttccacgttcattttccgcgcatatcacgctttacccccgctgacg
cgcaagcctgacggtcttcccgttggtgccgtctcgggtttctgcaacatgttgtggaag
ctgttgcaggagggactgaccccggaagaaggcgatgagccgactcattttgccgtcatt
ttcgatcattccgcacaaaccttccgaaacgagatctatcccgaatacaaggcccacagg
cctgagccgccggaagatctggtgccgcaattcggactgatccgcgaggcaacgcgtgca
ttttcggtgcattgcattgagcaggctgggttcgaggcagacgatttgattgcgacctac
gcccgtcaggctgcagagcagggtgcgcaggtcacgattgtttcgggcgacaaggacctg
atgcaattgatcggccccaaagtgggcatgatcgacaccatgaaaaacaagattttcggc
gagactgaagtctttgagaaatttggcgttgggccggacaaggtcatcgaagttcaatcg
ctggccggagacagcgtcgacaatgttccgggcgttccgggcatcggccttaagaccgcc
gctcttttgatcaacgaattcggcgatctggaaacactcctgtcccaggccgacacgatc
aagcagaagaaacgtcgcgaaaacctgatcgagtttgccgatcaagcccgtgtttccaag
gaactcgtgacgctcaagcaggatgttccggtggaaacaccggtcggcaatctctccgtc
accgacatggatggcccgaaagctgtcggttttctcaaggccatgggcttcaacacactt
acgaaacgggttgcggaaacaaccggagccgacattgccaatgtggaggcgagtgagttc
gaagtccctggttgggatgtccccgatcacaagggtcggatggctgaacgcgtcgaaaca
agttccggtgcagcaacaagcgacggtactcccggcgtagaaggcatgatggtgccgcag
acggtagcggacgcgcgcgctgaaagcgtgaaggcaattgcgattgattccagcgcctat
gaaactgtcacatcggtcgatcgcctgaaagaatggtgtgaagctgcctttgaaaaaggc
tatgtcgccttcgacactgaaaccacgtccttgaatgccatgcaggcggaccttgtcggc
ctgtcgctgtccaccgaacccgggaaagcctgttatgtgccgcttgcccatgttgacggt
gaaggcgatctgttggggggtgggggtcttttgccggaccagatacctcttcaggatgca
ttggatgttctgaagccgatgcttgaagatgcgtcggtgctgaaaattgcgcagaacctc
aaatacgattggctggtcatgacccgctatggcgtcgatatcggcccgttcgacgacaca
atgctgctctcttatacggttgacgccggcaagggtggcaacggcatggatgagttgtcg
gatcgatggctcgaccacaagccgatcccgttcaaggaagtctgcggttccggcaaatca
atgatcaccttcgacaaggtggctatcgacaaggcgacggcctatgcagcagaggatgcc
gacgtcaccttaaggctctggatggtccttaagccgcgtcttgtgtccgatcgcatggcg
acggtctatgaaacgctggaacgtcccatggttcctgtgctggcgcgcatggaaaaacgc
ggaatctccgtcgacaggcaaatgctgtccagactttccggtgatttcgcgcaaggcatg
gccgcgcaggaatcggaaatctacgaactggcgggtgaaaccttcaacatcggctctcct
aagcagttaggtgacattctgttcggcaagatgggtttgcccgggggcaagaaaaccaag
acgggggcctggtcaacctcggctcaggtcctggaggacctggcagccgaaggacacgaa
ctgccgtcgaaaattgtcgcatggcgccagctgtcaaagctgaaatcgacttactccgat
gcattgccgggttacatcaacccagaaacaaagcgtgtgcacacctcctacgcgctcgca
tcgaccacaacgggtcggctgtcctcttctgaaccgaaccttcagaatatcccggtgcgg
acagaggctgggcgcaagatccgccaggcgtttgtctctgaggcaggacataagctggtt
tcggccgattacagccagattgaactgcgcgttctcgcccatattgccgatatcccccaa
ctcaagaaggcatttgaagacgggcttgatatccatgccatgacagccagcgagatgttc
ggcactccgatcgaaggtatggatccgatggttcgtcgtcaggccaaggccatcaacttc
ggcattatttacggcatctctgcctttggccttgccaatcagctgggcatttcgcgcggc
gaagccggcgactacataaagacctattttgagcggtttccaggcatcaaggactatatg
gaagcgaccaaaaagaaggtccatgccgatggttttgtgtcgacgatattcggccgcaag
gcgcattaccctgaagtgaacaccaagaacccaaacatgcgcgccttctatgagcgcgcg
gccatcaacgcgccgatccaggggtcagccgccgacattctgcgccgtgcaatggtgcgc
atggaagacagactgaacagcgccaagctggatgctcaaatgctgctgcaagtgcatgac
gaactgattttcgaggtcccggatgcacaggttgacgagacgatcccggtgatcaaggac
gtcatggaaaatgcctgcgatccagccctcaccctttccatcccgctgcaggttgatgcc
cgtgcagccgacaattgggacgacgcccactaa
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