Roseibium porphyridii: K1718_02205
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Entry
K1718_02205 CDS
T09906
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
rpop
Roseibium porphyridii
Brite
KEGG Orthology (KO) [BR:
rpop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rpop03016
]
K1718_02205 (thpR)
Enzymes [BR:
rpop01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
K1718_02205 (thpR)
Transfer RNA biogenesis [BR:
rpop03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
K1718_02205 (thpR)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
NUFIP1
Motif
Other DBs
NCBI-ProteinID:
WFE90181
LinkDB
All DBs
Position
complement(465373..465909)
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AA seq
178 aa
AA seq
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MPRLFTGLEIPSETALMLSMLRGGLRGARWIDPENFHITLRFIGDIDDRTADEVAAALDR
IRRDPIDIRLNGLGSFGNGKPHAVWARVEPNAELAELQAEQERIIQRLHLPAERRKYVPH
VTVARCRSSTNEDVAKWLSERGNFQAQPFVAGRFVLFSAKASVGGGPYLVEEAYPLAA
NT seq
537 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgcctatttacaggccttgagataccgtcagagacggcactcatgctttctatg
ctccggggaggccttcggggtgctcgctggatcgatcccgagaactttcacatcacactt
cggttcatcggcgacatagatgaccggacagcagatgaagttgcagcagccctcgaccgg
atccgccgggatccgattgatatccggctgaacgggctcggttccttcggcaatggcaag
ccacacgcggtctgggctcgcgtcgagccgaatgcagagctcgccgaattgcaagccgaa
caggaacggatcattcagcggctgcacctgcccgcagaacgacgaaaatacgttccgcat
gtcacggtggcgcgttgcaggtcgtcgaccaacgaggatgtggccaaatggctcagtgag
cgcggcaactttcaggcacagccctttgttgcaggcagatttgttctgttttctgccaaa
gcaagcgtagggggtggaccttatctggttgaagaagcctacccgctcgcggcttga
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