Roseibium porphyridii: K1718_02805
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Entry
K1718_02805 CDS
T09906
Name
(GenBank) transcription antitermination factor NusB
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
rpop
Roseibium porphyridii
Brite
KEGG Orthology (KO) [BR:
rpop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rpop03009
]
K1718_02805
Enzymes [BR:
rpop01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
K1718_02805
Ribosome biogenesis [BR:
rpop03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
K1718_02805
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
NusB
Methyltransf_25
Methyltransf_31
Methyltransf_11
FtsJ
Methyltransf_12
RsmF-B_ferredox
Methyltransf_15
MTS
DUF6074
Motif
Other DBs
NCBI-ProteinID:
WFE90299
UniProt:
A0ABY8F4C9
LinkDB
All DBs
Position
579099..580475
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AA seq
458 aa
AA seq
DB search
MTRRPNNNRRPAATDGSQPADKPGFAARKVAADILGNVVHKKRPLDGELDTQSGHSGFRA
LAGNDRSLVRAIVGAGLRHRGEIAEILTRLLDRDIPEKTGRVLDILHVAIAQMLFLDVPD
RAAVSLAVDHAGLDRRARPYKGLVNGVLRRLGRERSDLTEDLDAELLNTPDWLWTSWQEA
YGEDLARKISTAHQKEAALDLSVKENPADWARRLDGVPVGVGTVRLFKKGAVEALEGFDD
GAWWVQDVAAALPAHLLGNVAGLKVADLCAAPGGKTAQLAAAGATVTAIDISKGRLKRLS
ENMQRLGLSVETVASDLRSYEPAVPFDAVLLDAPCSATGTIRRHPDVPWIKKPYDIEKLS
EIQAELLDRVIAWVKPGGLIVYCTCSLEAAEGETQVSAFLARQTGKIEVVEINADEIGGL
TECITAEGYLRCMPCYEAGETPETTGMDGFFAARFRRS
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
ttgacgagacggccgaacaacaatcgtagacctgctgccactgatggaagccagccagcc
gacaaaccgggctttgccgcacgcaaggtcgctgctgatattctcggcaatgtcgtccat
aagaaacgcccgttagacggagagctggacacacagtcgggtcactccgggtttcgtgcg
cttgccggtaacgacagatccctggtgcgggccatcgtcggagcgggcctgaggcacagg
ggcgagattgccgaaatcctgaccagactgctggatcgggatattccggagaaaaccggc
cgggttctcgacattcttcatgttgccattgcccagatgcttttcctggatgttccagac
agagcggcagtttcgctggcggtggatcatgcgggtctggatcgccgcgcgcggccctac
aaagggttggtgaatggcgttttgcgccgcttggggcgggagcgaagtgaccttactgaa
gatcttgatgccgaacttctcaacacgcctgattggctctggaccagttggcaggaagcc
tatggtgaagatttggcgcgcaagatttccacggcgcatcaaaaagaagctgcgcttgat
ctttccgtcaaggaaaacccggccgactgggcacgccgcctcgacggcgtgcccgtcggc
gtcggcaccgtgcgtctcttcaagaaaggagctgtcgaggctctggaggggtttgatgac
ggtgcgtggtgggttcaagatgttgccgcggcacttccagcgcacttgctggggaatgtt
gcaggcttgaaggttgcagatctttgtgcggcccctgggggtaagacagcacagcttgca
gctgcaggagccactgtcacggcaatcgacatttccaaaggccggctcaagaggctgtcg
gaaaatatgcagcgtttgggattgtccgttgaaaccgttgcttctgaccttcgaagttat
gaaccggcggtgccatttgacgcggtcttgctggatgcaccctgcagcgcaaccggtacg
atccgtcggcacccggatgttccctggatcaagaagccgtatgacattgagaaactttcg
gaaattcaagcagagctgctggatcgggtgatcgcctgggtcaagcctggcgggttgatc
gtctattgcacctgttcccttgaagctgcggaaggggaaacccaggtaagtgcgttcctg
gcgcggcaaaccgggaaaatcgaagtggttgagataaacgctgatgagatcggtggtctc
acagaatgcattacggctgagggttatttgcggtgcatgccgtgttacgaggctggtgaa
acgccggaaactacgggaatggacggatttttcgctgccagattcaggcggtcttaa
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