Roseibium porphyridii: K1718_03155
Help
Entry
K1718_03155 CDS
T09906
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
rpop
Roseibium porphyridii
Pathway
rpop00300
Lysine biosynthesis
rpop00470
D-Amino acid metabolism
rpop01100
Metabolic pathways
rpop01110
Biosynthesis of secondary metabolites
rpop01120
Microbial metabolism in diverse environments
rpop01230
Biosynthesis of amino acids
Module
rpop_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
rpop00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
K1718_03155 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
K1718_03155 (dapF)
Enzymes [BR:
rpop01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
K1718_03155 (dapF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
WFE90364
UniProt:
A0ABY8F6G5
LinkDB
All DBs
Position
complement(654513..655424)
Genome browser
AA seq
303 aa
AA seq
DB search
MASETRPFLKMNGLGNDFVVWDARVDPLRLSPEVVARLGDRETGIGFDQMITVERSSFGV
DAFMRIHNQNGGEVSACGNATRCIGRLLMEEAGKDLVTIETAAGLLHAFDAEGPRTVTVD
MGKPRFEWDQIPLAEEFADTRAIELQIGPIDDPVLHTPAAVSMGNPHAIFWVDDVEGYEL
ERFGPLLEQHPIFPEGANISLAHIFDEDQIRVKVWERGVGLTLACGTAACAVGVAAARDG
KTGRKTTIHLPGGPIGIEWRESDEHVLMTGLTEVEFEGEVDFETLTWRKTGAGDASTEAE
AAS
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctgaaaccagaccctttttgaagatgaatggccttggcaatgatttcgtggtc
tgggacgcacgggtagatcccttgcgcttgtccccggaagtcgtcgcacgtcttggcgac
cgggaaaccggtattggcttcgatcagatgatcaccgttgagcggtcctcatttggcgtt
gatgcattcatgcgcattcacaatcagaacggtggcgaggtgtccgcctgcggcaacgcc
acacgctgcattggccgtcttctcatggaagaagccggcaaggacctggtaacgatcgag
acggcggccgggctgctgcatgcctttgatgccgagggtccgcgtaccgttacagtcgac
atggggaaaccgcgctttgagtgggatcagatcccgcttgccgaggaatttgccgacacg
cgcgcgattgagctgcagatcggaccgatcgacgatccggtcctgcacacaccggcagct
gtcagcatgggcaatccgcatgcgatcttctgggtcgacgatgtagaaggatatgagttg
gagcggttcggcccgcttttggaacaacatccgatttttcccgagggcgccaacatctct
ctggcacatatcttcgatgaggatcagatccgggtaaaggtgtgggagcgtggcgtcggc
ctgacgctcgcctgcggcaccgccgcctgtgcggttggcgttgctgccgcacgcgatggc
aagaccggtcgcaaaaccaccattcatcttcccggtggaccgatcggcattgaatggcgg
gagagcgacgaacacgtcctcatgaccggcctgaccgaagtggaattcgaaggtgaagtc
gattttgaaacactcacctggcgcaagactggagccggcgacgcttcgacggaggcggag
gcggcctcatga
DBGET
integrated database retrieval system