Roseibium porphyridii: K1718_03565
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Entry
K1718_03565 CDS
T09906
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
rpop
Roseibium porphyridii
Brite
KEGG Orthology (KO) [BR:
rpop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rpop03000
]
K1718_03565
Transcription factors [BR:
rpop03000
]
Prokaryotic type
Helix-turn-helix
Other families
K1718_03565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activ_2
Sigma54_activat
AAA_lid_14
GAF
HTH_8
HTH_30
AAA_5
HTH_23
HTH_50
HTH_24
HTH_AsnC-type
Motif
Other DBs
NCBI-ProteinID:
WFE90441
UniProt:
A0ABY8F5D8
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Position
740643..742391
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AA seq
582 aa
AA seq
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MRDHEHVSEIDRVLNGFETGRDGLVSQSWRRCVETYGMDPTRPEPAHIVTADQLREHQEQ
SERLIATARSGLQSLFKQVAGQNYVLLLADAKGICVDFFGDPRFEDELRLAGLYLGSDWS
EELAGTCGVGSCLVTGEAVTIHQSDHFGFAHTPLSCTSAPIYDTSGNLAAVLDVSLLRSP
SPKSSQNLAMNLVKASVRRVEMANLMAMTRRDWVLRFSTSAEFLEVDPEAAVALDENGTI
IGMTHGARECLAPEGRTELIGTRIDMHMDLDVDALPDLMRGRPTEERVLRLRDGRGLFGH
AIAPQSARLPRHSETGSVSGPLRGFCGPDPMLRQLMSKLARLAPTQVPLLLLGETGTGKE
YLARAIHVLGPADRSFHLVTCSGLNRSQIEGLRSAGAGTLFLKGIEDLDADGQGAVLALL
ESRDDLRVIASTRQDPVGPQVAQLIRPELYFRLAGAVLPVTPLRHRQDFEWLVDRLLRRS
PRNFRLSPAALAELRGREWRGNVRELATALDVAIALSEGSVIDLPDLPPPPLARHIETDP
TEDLESLLDACNWNMSVTARRLGVNRSTVLRRVRKAGLLRKT
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgatcatgaacatgtgagcgagatcgaccgggttctaaatggttttgaaactggc
cgggacgggcttgtctcgcaaagctggcgccgttgcgttgaaacctacggcatggacccg
acgcgtcctgagccggcgcacattgttactgccgatcagcttcgcgaacaccaggaacag
tctgaacgtctgattgcgacagcccggtccggcctccaaagtcttttcaagcaggttgcc
ggtcagaattatgtcctcttgctcgcggatgcgaagggcatctgcgtggacttcttcggc
gatccgcggtttgaagacgagttgagactggctggactctatctagggtcggactggtcg
gaagagcttgcggggacctgtggtgttggttcttgtcttgttaccggcgaggcagtgacg
atccatcaaagtgatcatttcgggtttgcgcatacgccattgtcctgcacgtctgcgccg
atctacgacacaagcggtaatcttgcagctgttcttgatgtttcgttgctgcggtcccct
tctccgaagtcgagccagaaccttgcgatgaacctcgtcaaggcatcggtaaggcgcgtc
gaaatggccaacctcatggccatgacacgccgggactgggttttgcggttttcaacatcg
gctgaattcctggaagtcgacccggaggctgctgtcgcgctcgatgaaaacggcacgatt
atcggcatgacccacggggccagagagtgtctggcgcctgaaggccgaaccgagttgatc
ggcactaggatcgacatgcatatggatcttgatgtcgatgcattgccggatctcatgcgc
ggccggccaacggaggaacgtgttcttcgtcttcgggatggacgaggcctctttgggcac
gccattgcaccacagtcagcgcgcctcccgcgtcattccgaaacgggctccgttagcgga
cctttgcgtggcttctgcggtcctgatccaatgctgcggcagcttatgtcgaagctcgca
cgccttgcaccgacgcaagtcccattgctgctgttgggagaaacgggaaccggtaaggag
tatcttgcacgggcaattcatgtgctcggtcctgccgacaggtcttttcatctcgtgacc
tgttcaggattgaacaggtcacagatcgaaggattgcgcagtgctggcgcaggaacgctc
ttcctcaaaggcattgaagatctggatgctgacggtcaaggtgccgtgctggcattgttg
gaatcgcgagacgatctgagggtgatcgcgtccacgcgccaggaccccgtcggacctcag
gttgcccagttgatacggccggaactctatttccggctggctggggctgttctgccggtc
actccgctgcgtcatcgccaggattttgaatggttggtcgaccgtctcctgagacgatct
ccccgaaacttccgtctttctccggcggcacttgccgaacttcgcgggcgggaatggcgc
ggcaatgttcgagaactagcaaccgcacttgatgttgcgatagcgctttcggaaggatcc
gtgattgatctgccggacttgccgccgccacctcttgccaggcacatcgaaacagacccg
acagaggatctggagtcacttctcgatgcctgcaactggaatatgtccgttactgcgcgg
cgtctcggcgtaaaccgttcgacagttctgcgacgggtgcgcaaggctggcctgttgcgc
aagacctga
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