KEGG   Roseibium porphyridii: K1718_04775
Entry
K1718_04775       CDS       T09906                                 
Name
(GenBank) AMP-binding protein
  KO
K01897  long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
Organism
rpop  Roseibium porphyridii
Pathway
rpop00061  Fatty acid biosynthesis
rpop00071  Fatty acid degradation
rpop01100  Metabolic pathways
rpop01212  Fatty acid metabolism
rpop02024  Quorum sensing
rpop04146  Peroxisome
Module
rpop_M00086  beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:rpop00001]
 09100 Metabolism
  09103 Lipid metabolism
   00061 Fatty acid biosynthesis
    K1718_04775
   00071 Fatty acid degradation
    K1718_04775
 09140 Cellular Processes
  09141 Transport and catabolism
   04146 Peroxisome
    K1718_04775
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    K1718_04775
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01004 Lipid biosynthesis proteins [BR:rpop01004]
    K1718_04775
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rpop04147]
    K1718_04775
Enzymes [BR:rpop01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.3  long-chain-fatty-acid---CoA ligase
     K1718_04775
Lipid biosynthesis proteins [BR:rpop01004]
 Acyl-CoA ligase
  Long/very long chain acyl-CoA ligase
   K1718_04775
Exosome [BR:rpop04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   K1718_04775
  Exosomal proteins of breast cancer cells
   K1718_04775
SSDB
Motif
Pfam: AMP-binding AMP-binding_C_3 YwhD
Other DBs
NCBI-ProteinID: WFE90666
LinkDB
Position
1005572..1007500
AA seq 642 aa
MRNAKVFGNRTAFREKDLGIWQSWTWSEVSDEIRAFSIGLKTLGLEPGDKIAIVGSNRPR
LYWSMVAAQAIGAVPVPVYADSVAEEMAYVLGHAEVKFAAVQDQEQVDKLLSMTDEVTSL
KHIVYDEPRGLRDYDHTHLHDFDSVGDLGREQLSKSASLAAEWEQGFAESKGSDIAVMLY
TSGTTGRPKGVMLSFDNLVISARNANVFDHLNETEEVLAYLPMAWIGDHVFSLAQAFTAG
YCVNCPEGMDTIDVDRREIAPTYFFAPPRVFENMLTMIMVRMEDAGKTKRSMFNYFMDLA
RNVGEKILNGEDVGLKNRLLYKLGEFCVYGPLKNRMGLTRMKVGYTAGEAIGPEIFQFYR
ALGLNLKQLYGQTEASVYITLQPDGEIFGDTVGKPAPDVELKIADSGEVMYRSPGVFVGY
FKNDEATEKTKTADGWVHTGDAGIIAENGHLKIIDRAKDVGKLNDGALFAPKYIENKLKF
FPNIKEAVAFGHERDMVAVFINIDLTAVGSWAERNNVNYASYQELAANPDVYAMIESHVD
QVNRDLSKEPMMAGAQVRRFLILHKELDADDGELTRTQKVRRSFIAERYDPLIEALYDGS
TSKHVKTEVTFEDGRKGAIEATVEIRDMNSYEAGKGFQEAAE
NT seq 1929 nt   +upstreamnt  +downstreamnt
atgcgcaacgcaaaggtattcggaaaccggacagcattccgggaaaaggatctgggcatc
tggcaaagctggacctggtccgaggtgtcagatgaaatacgcgcattctccatcggattg
aaaactctgggtttagagccaggagacaaaatcgcaatcgtcggatcgaatcggccacga
ctttattggtccatggtcgcagcgcaggccatcggcgcagtgcccgtgcccgtctatgcc
gacagtgttgcggaagagatggcgtatgttctcggacatgccgaggtcaagtttgccgct
gttcaggaccaggaacaggtcgataaattgctgtcgatgacagacgaagttacgtcgctg
aaacacatagtttatgacgaaccgcgcggacttcgcgattacgaccacacccatctgcac
gattttgactccgtcggcgatctgggccgtgagcaattgtcgaaatccgcatctcttgca
gccgaatgggagcagggctttgccgagagcaaaggcagcgatatcgcggtgatgctttat
acgtccggcacgaccgggcgccccaaaggtgtgatgctgtcattcgacaatctggtgatc
tcggccagaaacgccaatgtcttcgaccatctgaatgagaccgaagaagtcctggcctat
ttgcccatggcctggatcggcgaccacgtcttttccctggcgcaggcttttactgctgga
tactgcgtcaactgtccagaaggcatggacaccattgacgtagaccgtcgcgaaattgca
ccgacctatttcttcgcaccgccgcgcgtatttgaaaacatgctcaccatgatcatggtg
cggatggaggatgccggaaaaaccaaacgctccatgttcaactatttcatggatctggcg
cggaatgtcggcgagaaaatcctcaatggcgaagacgtcggcctgaagaatcgtcttctc
tataagctgggagaattctgcgtctacgggccactcaagaatcgcatgggcctgacccgt
atgaaggtgggctacaccgcgggcgaagccatcggccccgaaatttttcagttttaccgg
gcgctcggtctgaacctcaagcaactttatggccagactgaagccagtgtttacatcaca
ctacagccggatggagagatcttcggagacacggtcggaaagcccgccccggatgtggag
ctaaaaatcgccgacagcggcgaagtcatgtaccggtcgcctggcgtgtttgtgggctat
ttcaagaatgacgaggcgactgaaaagaccaagaccgcagacggatgggttcacaccgga
gacgccggcatcattgccgaaaacggccatctgaaaatcatcgacagggccaaggatgtc
ggcaagctcaatgacggcgctctgttcgctccgaaatacatcgagaacaagctcaagttc
ttccccaacatcaaggaagccgttgctttcgggcatgagcgggacatggttgccgtcttt
atcaatatcgatctgacagccgtcgggtcctgggcggagcgcaacaacgtcaactatgcc
tcctatcaggagctggccgccaatcccgatgtgtatgcgatgatcgaaagtcatgtcgat
caggtaaaccgggacctctccaaagagccaatgatggcgggcgctcaagtcagacggttc
ctgatcctgcacaaggagctggacgcggatgacggagaactgacacggacgcagaaagtc
cgtcgttccttcatcgcagagcgttatgacccgctgatcgaagcgctttacgacggttcg
acttccaaacacgtgaagaccgaagtgaccttcgaagatggccgcaagggcgcaatcgaa
gccaccgtcgagatccgcgacatgaattcctacgaggccggcaagggctttcaggaggct
gccgaatga

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