Roseibium porphyridii: K1718_04995
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Entry
K1718_04995 CDS
T09906
Name
(GenBank) RluA family pseudouridine synthase
KO
K06177
tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:
5.4.99.28
5.4.99.29
]
Organism
rpop
Roseibium porphyridii
Brite
KEGG Orthology (KO) [BR:
rpop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rpop03009
]
K1718_04995
03016 Transfer RNA biogenesis [BR:
rpop03016
]
K1718_04995
Enzymes [BR:
rpop01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.28 tRNA pseudouridine32 synthase
K1718_04995
5.4.99.29 23S rRNA pseudouridine746 synthase
K1718_04995
Ribosome biogenesis [BR:
rpop03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
K1718_04995
Transfer RNA biogenesis [BR:
rpop03016
]
Prokaryotic type
tRNA modification factors
Psudouridine synthases
K1718_04995
BRITE hierarchy
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
WFE90706
LinkDB
All DBs
Position
1054828..1055499
Genome browser
AA seq
223 aa
AA seq
DB search
MNLPAPTAFHYKPPMSPYLEVLHVDAELLVVNKPSGLLSVPGKAPEHSDCIEKRAREAHD
QSRIVHRLDMDTSGVMVLAMNGKSHRHLGLQFERRKTEKTYVAVVWGHVLEDTGEVDLPL
ICDWPNRPKQMVSFEHGKPAQTRWQVLERDAQTTRLRLFPLTGRSHQLRVHMLSLGHPII
GDRFYASDEALNASDRLALHAESLTLHHPANGERVTFRAECPF
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atgaatctgcctgctccgacagcgtttcactataagcctccgatgagcccttatcttgag
gtgcttcatgtcgatgcggagttgcttgtcgtgaacaagccgagcggtctgctcagtgtt
ccgggaaaagcgccggagcactcggactgcatcgagaagcgggcgcgggaggcgcatgat
cagtcccgtatcgtgcacaggctggacatggatacatccggggtgatggttctggccatg
aatggcaagtcccatcggcatctcggcttgcagtttgagagacggaaaaccgaaaagacc
tatgttgcggtggtgtggggccatgtgcttgaggacacgggagaggtcgatctgccgcta
atttgcgactggcccaacagacccaaacagatggtcagtttcgaacatggaaaaccggcg
cagacacgatggcaggttcttgagcgcgacgcgcagacaacgcgtctgcgcctctttccc
ctgacggggcgctcacatcagttgcgggttcatatgctctcgctcggccacccgatcatc
ggagacaggttctatgcatcggatgaagccttgaacgcctcagaccgtctggcgcttcac
gctgaaagcctgactttgcatcacccggcgaatggcgagcgggtcacgtttcgtgccgaa
tgcccattttag
DBGET
integrated database retrieval system
