Roseibium porphyridii: K1718_06405
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Entry
K1718_06405 CDS
T09906
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
rpop
Roseibium porphyridii
Pathway
rpop02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rpop00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
K1718_06405
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rpop02000
]
K1718_06405
Transporters [BR:
rpop02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
K1718_06405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
WFE90978
LinkDB
All DBs
Position
complement(1356550..1358088)
Genome browser
AA seq
512 aa
AA seq
DB search
MSKSKILATFAALGLLALPTTTHAVAETHLTVAVKADRYSVKPDKFTFTTRRPAAQIAET
AVKPDANFNPSPLLFKAWDYEDGTYKVTLQEGVTFSDGTPFNADSAIASLKLYDQNKSDF
LQLDQSSFKKLDDYQISFRSEVESALVIENMTHRGASLFLPTDAMAEYPVGTGPYVLESY
EPKKQITVTRNPNYWGQAPKIDKITFLFIGDDNARLLALQNGEVDVIGEVTPQMMLSMPQ
DGSVVLNESRPIRYAALMFNMLGKAPFDITTDISVRQALALAIDRETLAQVLYGGRGQAA
KTILPGWMFDLGDDHANGFAYDPSKAGKMLDEAGWVIGEDGIREKDGRKLKLRMVAAYPN
VSTVKPMPEMLEQMFAAIGVGTEIVEVTDSGVYNDTYFGPGQADMYLEFASNNNTDPTYL
LYNVFTTMSPWGYAVTSPGGNVDELAKASRVASSREEAIDLVRQAYKSIVDEHTSSIPIL
LVPNFTLSRPGVSVPISEYADWIGYGDVSFDN
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaatccaagatcttggccaccttcgccgcgctggggctgctcgcgctgccaacc
acaacgcatgccgttgccgaaacacatttaacggtcgcggtcaaagcggaccgctatagt
gtcaagcctgacaagttcacctttacgaccaggcggcctgctgcccagatcgctgaaact
gcagtcaagccggacgcgaatttcaacccctcaccgcttctgttcaaggcttgggactac
gaagacggcacgtacaaagtgaccctgcaagagggtgttacattttcagatggcacaccc
ttcaatgccgacagcgcaattgcctctctcaagctgtacgatcagaacaaatccgatttt
ctgcaactcgatcaaagcagcttcaaaaagctggatgactatcagatctcgttcagatca
gaagttgaatcagccctggtgatcgagaacatgacccatcggggagcatcattgtttctg
ccgacggacgccatggccgaatatccggttggtaccggcccatatgttttggagagttac
gaacccaaaaagcagatcaccgtaacccggaaccccaactactggggacaagcacccaag
atagacaagatcacctttcttttcatcggcgatgacaatgcccggctgttggcactgcaa
aatggcgaagttgatgtcataggcgaagtaaccccgcaaatgatgttgtccatgccacaa
gatggttccgtcgttttgaatgagagccgcccaatccgctatgcagcgcttatgttcaat
atgctcggcaaagcccccttcgacatcacgactgatatcagcgttcgacaggctctggct
ttggcgatcgaccgcgaaacgttggcccaggtgctttatggcggacgcggtcaggctgcc
aagacaatcctgcctggctggatgtttgatcttggggacgatcatgccaatggctttgca
tatgacccgtcgaaagctggcaagatgctcgacgaggccggttgggtcataggcgaagac
ggcattcgcgaaaaggacggtcgcaagctcaagcttcgcatggttgccgcctatccgaac
gtttcaacggtaaaaccgatgccggaaatgctggagcagatgtttgccgccatcggtgtc
ggcaccgaaatcgtcgaagtaaccgacagtggcgtatacaacgacacgtatttcgggccc
ggtcaggcggacatgtatctggagtttgcctccaacaacaacaccgaccccacctatctt
ctctacaatgtcttcacaaccatgagtccttggggttatgccgtcacgtcgcctggaggc
aatgtggatgagctggccaaagcctctcgggtggcatcaagccgcgaagaggccatcgat
ctggtgcggcaggcgtataagtccatcgtagacgaacatacatccagcattccgatcctt
ctggtaccgaatttcaccctgtcacgtccgggtgtatcggtaccgatctcggaatatgct
gactggatcggctatggcgatgtcagcttcgacaactga
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