Roseibium porphyridii: K1718_09495
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Entry
K1718_09495 CDS
T09906
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
rpop
Roseibium porphyridii
Pathway
rpop03030
DNA replication
rpop03430
Mismatch repair
rpop03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rpop00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
K1718_09495
03430 Mismatch repair
K1718_09495
03440 Homologous recombination
K1718_09495
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rpop03032
]
K1718_09495
03400 DNA repair and recombination proteins [BR:
rpop03400
]
K1718_09495
Enzymes [BR:
rpop01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
K1718_09495
DNA replication proteins [BR:
rpop03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
K1718_09495
DNA repair and recombination proteins [BR:
rpop03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
K1718_09495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
RNase_H_2
Rv2179c-like
DEDDh_C
PAS
Multi_Drug_Res
Motif
Other DBs
NCBI-ProteinID:
WFE91571
LinkDB
All DBs
Position
2052309..2053721
Genome browser
AA seq
470 aa
AA seq
DB search
MFTSLSLRFRIFLLFAGVTAGSILVVGFSLYFGFLRTTETSPASGFVFAAILSGFGLLAI
SAGVWLLFDENVAKPIEHMASAMRTRIHANTDAPFDLDQARYLGDLAPALRAVSGRLSEV
SEDADQLVAEETSRLTAERAHLALLLTEIPVAIVLVSPANRIMLYDGQAADVLGQVQVPR
LSASIFDYFEEADLTSGLEQLDEARQEVEASVRGTRGNLKFRLRLKKLSAATGYMILIDG
TDASIAPDAARPLIYDFDLSARETEREIENIPLKDISFVVFDTETTGLMPNKDEIVQIGA
VRVVNGRIVEGETLDQLVNPGRPIPPASTKVHGVSDDMVADAPGAEQAVSLFHDFARDAV
IVAHNAPFDMAFLRRHGRLSGLAWEHPILDTVLLSAVVFGTGEDHSLDGLCDRLGVEIPD
NLRHTALGDARATAEALCKLLPVLISLGFETFGQVVQQTRRHGRLLKDLN
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgtttacctcgctcagccttcgcttccgtattttcttgctgtttgccggggtcaccgcc
ggtagcattctagtagttgggttttcgctctatttcggatttttgagaacaacggaaacc
agcccggcctctggatttgtgtttgcagctatcctttccggatttgggctgctggcgatt
agtgctggcgtctggttgctgtttgatgaaaacgtcgccaagccaattgaacatatggca
tctgcgatgcgtacgcgtattcatgccaacacggacgctccattcgatctggatcaggca
cgttatcttggtgatcttgcgccggctcttcgggccgtatcgggcagattgtctgaagta
tcagaagatgctgaccagctggttgccgaggaaaccagccggctgacagctgagcgagcg
catctggctttgctgctgaccgaaattccggtggcgatcgttctcgtcagtcccgcaaac
cgcatcatgctttatgacggtcaggcggcggatgtgttggggcaggttcaggtgccgcgc
ttaagcgcgtccatcttcgactattttgaggaagccgatctgacatcgggacttgaacag
ctcgatgaagcccgacaggaggttgaggcaagtgtgcgcggcacacgtggcaacttgaaa
ttcaggttgcgcctgaaaaagctttccgcagccaccgggtacatgatcctgatcgatggc
acagacgcctccatcgcaccggatgcggcacggcccttgatctatgattttgatttgtcg
gcgcgcgagacggagcgcgagattgagaatatcccgctaaaagatatcagtttcgttgtg
ttcgataccgagacgacgggattgatgcccaacaaagacgagatcgtgcagattggcgca
gtcagggttgtgaatgggcgcattgttgaaggtgaaacgcttgatcagctcgtcaatccg
gggcgtcctataccgccggcatcaaccaaggttcacggggttagtgacgacatggttgcg
gatgcgccgggcgcagagcaagctgtttcgctctttcacgattttgcccgggatgccgtg
attgttgcgcataatgcgccattcgatatggcatttctccggcggcatggcaggctgtca
gggcttgcgtgggagcacccgatcctggatacagtgctgctttcggccgttgtattcggg
acaggtgaagatcattccctcgacggattatgcgacaggcttggtgtcgaaattcctgat
aaccttcgccacaccgcgctgggcgatgcgcgggcaaccgccgaggcgttatgcaagttg
ttgccggtcctgatctcgcttggatttgaaacattcgggcaagttgttcagcaaaccagg
cggcatggcaggcttttgaaggatctgaactaa
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