Roseibium porphyridii: K1718_13655
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Entry
K1718_13655 CDS
T09906
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
rpop
Roseibium porphyridii
Pathway
rpop03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rpop00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
K1718_13655
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rpop03021
]
K1718_13655
03400 DNA repair and recombination proteins [BR:
rpop03400
]
K1718_13655
Enzymes [BR:
rpop01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
K1718_13655
Transcription machinery [BR:
rpop03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
K1718_13655
DNA repair and recombination proteins [BR:
rpop03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
K1718_13655
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
DUF211
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
WFE92362
LinkDB
All DBs
Position
2909091..2910113
Genome browser
AA seq
340 aa
AA seq
DB search
MTIQKNWQELIKPTKLEIKPGDDPRFLATVVAEPLERGYGLTLGNALRRILLSSLQGAAV
TAVQIDGVLHEFSSIPGVREDVTDIVLNIKEIAIRMEGEGPKRMVVRKQGPGVVTAGDIQ
TVGDVEVLNPELVLCTLDEGAEIRMEFTVNTGKGYHSSDRNRPEDAPIGLIPVDSLYSPV
KKVSYKVENTREGQVLDYDKLTLTIETDGSVKPDDAVAFAARILQDQLSIFVNFEEPQRE
VAEDTVPELAFNPALLKKVDELELSVRSANCLKNDNIVYIGDLIQKTEAEMLRTPNFGRK
SLNEIKEVLAQMGLHLGMEVANWPPENIDDLAKRYEDHQY
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
gtgaccattcaaaaaaattggcaggaactgatcaagccgaccaaactcgagatcaagccg
ggtgatgacccgcgcttcttggcaacggttgttgccgagccgctcgagcgtggctacggc
ttgacactgggcaacgccctgcgccgcattcttctgtcctccctgcaaggggcggcggta
accgcggttcagatcgatggcgttctgcatgagttctcgtcgatcccgggtgtccgggaa
gatgtcaccgacatcgtgctcaacatcaaggaaatcgccattcgcatggaaggcgaagga
cccaagcgcatggttgtgcgcaagcagggaccaggtgttgtgacggccggtgatatccag
acagtcggcgacgtggaagtgctcaacccggaactggttctctgcacactcgacgaaggc
gctgaaatccgcatggaattcaccgtcaacaccggtaaaggctaccattcttctgatcgc
aaccggccggaagatgctccgatcgggttgattccggtcgacagtctttactcaccggtc
aagaaggtctcctacaaggtggaaaacacccgtgaaggccaggttcttgactatgacaag
ctgaccctgaccattgaaaccgatggttccgtcaagccggatgatgccgtggctttcgca
gcgcgcattctgcaggatcagctttccatcttcgtcaatttcgaagagccgcaacgcgaa
gtcgccgaggacactgttccggaactggctttcaacccggcgcttttgaagaaagtcgac
gagctggaactgtctgtccggtctgcaaactgcctgaagaacgacaatatcgtgtatatt
ggcgatctcattcagaagaccgaagcggaaatgctgcggacgccgaatttcggccgcaag
tcgctcaacgaaatcaaagaagttctcgctcagatgggcctccatctcggcatggaagtc
gccaactggccgcctgagaacatcgatgatctcgccaagcgctacgaagaccatcagtat
taa
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