Roseibium porphyridii: K1718_15580
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Entry
K1718_15580 CDS
T09906
Name
(GenBank) ABC transporter transmembrane domain-containing protein
KO
K12541
ATP-binding cassette, subfamily C, bacterial LapB
Organism
rpop
Roseibium porphyridii
Pathway
rpop02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rpop00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
K1718_15580
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rpop02000
]
K1718_15580
02044 Secretion system [BR:
rpop02044
]
K1718_15580
Transporters [BR:
rpop02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
K1718_15580
Secretion system [BR:
rpop02044
]
Type I secretion system
Adhesin protein transporter
K1718_15580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
AAA_16
SMC_N
DUF87
AAA_22
MeaB
AAA_30
AAA_29
RsgA_GTPase
DUF1839
SseC
Motif
Other DBs
NCBI-ProteinID:
WFE87584
LinkDB
All DBs
Position
complement(3342012..3343604)
Genome browser
AA seq
530 aa
AA seq
DB search
MPLAILQVYDRVLPNASTDTLLVLMLGVSGVLIVDAFFKIARAAVVGRLGAGFNHQAHTE
LFRRVLDADPADFSKTPVSVQVHKLRSLQSIADHYGDQGRLLAIDLPAGGIFLAVLVFIG
GPLALVPVVLLGLFLLFALKRNKYLQQVVADRAEQDDRKSDFILEVLSGAKTVKSQAMEA
LIMRRFERLQRTTANLSAKYMRMSGQARDASALFGTMTTVLVVIFGALMVIQGTFSIGGV
AASTLLSGQFIQPFLRAINQLTDMQRLKHDYSQVHELFSLPEVKIQHAIKGETDGSINLV
NVDVDKGDTGRQVFAKLNLTVETGQFVGFRGADGSGKSTLMKVLTGELKPNSGHVLIGGL
DYDGPYEHALRRTVAYVDNQSAIFNGTILENITMFGAVADIAHARMAAKLIGLEKEIHLL
PKGYETQLGSDLGGKVPTSTLQRICIARALASEPKILILDEANAQLDQIAEKSLIQALVR
LKGYLTVVIISHRPSMLAVADHQFELRGGQIHALEASFDTDRQQTGGRSA
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atgccgctggcgattctgcaggtatatgaccgcgtgttgccaaacgcctccaccgatacg
cttctggtgcttatgctcggcgtttctggcgtcctgatcgtcgatgcctttttcaagatc
gcgcgggcagcagtcgttggccgtctgggagcagggttcaaccatcaggcacacacagag
cttttccgccgggtcctggatgcagatcctgcagacttctcaaagacgcccgtatcggta
caagttcataagctaaggtcacttcaatcgatcgcagaccactatggcgatcaggggcga
ctgctggctattgatttgcccgcaggtggaattttccttgccgtgctcgtgtttattgga
ggaccgctggcactcgtgcccgttgtattgcttggattgtttttactctttgcgttgaag
cgaaataaatatctgcagcaggttgttgccgacagggcagaacaggacgatcgcaagtca
gacttcattctggaagtcctttccggtgccaaaaccgtgaaatcgcaggcaatggaagcg
ttgatcatgcgtcggtttgaacggcttcagcgcacaaccgccaatctcagcgccaagtat
atgcgaatgtctgggcaggccagggacgcttcagctctctttggcaccatgacgacggtt
ttggtcgtcattttcggagccttgatggttatccaaggaactttcagcattggtggtgtc
gcagccagcaccctgctatccggccagttcattcagccattcctgagggcaatcaatcaa
ctcaccgacatgcagcgtctcaaacatgattattcgcaggtccatgagttgttttcgttg
cccgaagtcaaaattcaacatgcaatcaagggtgagaccgacggatcgatcaatctggtc
aatgttgacgtcgataagggagatactggacgtcaagttttcgccaaattgaatctgact
gtcgaaactggacagtttgtcggttttcgcggggcggacggaagcggaaaatcgaccttg
atgaaggtcctgacaggcgagttgaagccgaattcaggccacgtactcattggtggtctt
gactatgacggtccttatgaacacgcgcttcgacgcaccgtggcatatgttgacaatcaa
tccgcgatcttcaacggaaccatacttgaaaacataaccatgttcggggctgtcgcagat
atcgcgcatgcgcgcatggcggcgaagctgatcggtctggaaaaggaaatccatcttctg
ccgaagggctatgaaacgcagctggggtcagaccttggcggaaaagttccaacatcgacg
ctgcaacgcatctgtattgcacgcgcattggcgagcgaaccaaaaatactaatcctggac
gaagccaatgcccaattggatcaaatagccgaaaaaagccttatccaggccctcgtgcgt
ctgaaagggtatctgaccgttgtcatcatcagccaccgtccgtccatgctggcggttgcc
gaccatcagtttgaattgagaggcgggcaaattcatgccctggaagcttccttcgacact
gatcgtcagcaaacggggggacggtcggcatga
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