Roseibium porphyridii: K1718_15660
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Entry
K1718_15660 CDS
T09906
Name
(GenBank) L,D-transpeptidase family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
rpop
Roseibium porphyridii
Brite
KEGG Orthology (KO) [BR:
rpop00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rpop01002
]
K1718_15660
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rpop01011
]
K1718_15660
Peptidases and inhibitors [BR:
rpop01002
]
Cysteine peptidases
Family C82
K1718_15660
Peptidoglycan biosynthesis and degradation proteins [BR:
rpop01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
K1718_15660
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Scaffold
YkuD
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
WFE87600
LinkDB
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Position
complement(3366485..3368482)
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AA seq
665 aa
AA seq
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MRTDTSANCKQVGAKGKTAVKSRAGTFFGTSLKTGLMASVLATGFAIAPVEPASAQNFFQ
RLFNPEHQRREQERLRQEELKRKVSKVRVSAPRYLNYRPDDWKQLPLGELSEKKTAEIQP
AAQSVEAGDPATLDAEPATVVPVVLTAFDEARPALKDMTLMGLPEVGEALVAFYREHPDF
AWTEDGQPTAKAKQLRDALEKAGDFALNPADYFVPLPEASGAEEANQDAATMQFEMALSA
AALTYVLDAKRGRVDPNRISQYHDLPRHDVDLVAALENLKSATNIAETLQSNQPQNSHFK
ELTAELERLKAEDEATDQIVIAPGTFLKAGKSSPEMKNIVAAIQKNGSVELRTAHSGTLE
AYEGDDLYSPELVELVKAFQKENKLTPDGIVGKNSIKAMVGETNAAKIAKVELAMERSRW
MPEELGERKVFINQPAFTATYSAPGEDPLSMRVVVGKKSNQTNFFYDKIEIVEYNPYWGV
PYSIIVNEMLPKLAKDPSYLDRAGYEVTTAGGRKVSSSSVNWYAVASKQQTINVRQYPGR
SNALGEVKILFPNRHHIYMHDTPSKSLFNKDVRAFSHGCIRLHDPKAMAAAVLGKSKDYV
SSRISAGQNEQEKVTGDLPVYVSYFTAWPELDGTIAYYTDIYDRDRHLLKALEKTEAVRA
KARAS
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atgcgaacagacacatcagcgaattgcaagcaggttggtgccaaaggcaagaccgccgtc
aagagccgcgcaggaacctttttcggcacatccttgaaaaccggccttatggcttcggtg
cttgcgacaggctttgccattgcacctgtggaaccggcatccgcccagaatttctttcag
cgcctcttcaatccggagcatcagcgccgcgagcaggaacggcttcgccaggaagagctc
aaaaggaaggtttcgaaggtgcgggtctccgctccacgctatttgaattatcgacccgat
gattggaagcagctgccgctcggagaattgtctgaaaagaaaaccgcagaaattcagcct
gcggcccagagtgtcgaagccggcgacccggcaaccctggacgcagaaccggccactgtt
gttcctgttgtactgaccgcatttgatgaagcacgccccgcgttgaaagacatgaccctg
atgggacttccagaggttggggaagctcttgtcgcattttatcgcgaacatcccgatttt
gcctggactgaggacggtcaaccgacagccaaggcaaagcagctccgtgacgcactcgaa
aaggccggtgacttcgccctcaatccggcagactattttgtgccgcttccagaagcctca
ggtgcggaagaggccaatcaagatgctgcgacaatgcagttcgagatggcgctcagcgct
gccgcactgacctatgttctggatgccaagcgtggccgcgtcgaccccaaccggatttcg
caatatcacgatctgcctcgccatgatgttgatctggttgctgcgcttgaaaatctgaaa
tctgcaacgaatattgctgaaacccttcaatcaaaccagccgcaaaattcccatttcaaa
gagttgaccgctgaacttgagcgtttgaaggctgaagacgaagcaaccgatcagatcgtg
atagcgcccgggactttcctgaaggcaggcaagtccagtccggagatgaaaaacatcgtt
gctgctatccaaaagaacggatcggttgagttgaggaccgcccactccggaacgctggaa
gcgtatgaaggtgacgacctctattcacctgaactggtcgagttggtcaaagcctttcaa
aaggaaaacaaactgacgccagacggtattgtcggcaagaactcgatcaaggccatggtc
ggagaaaccaatgctgcaaagatcgccaaagttgaactggcaatggagcgcagccgctgg
atgccggaagaacttggcgagcggaaagtcttcatcaaccagccggcatttaccgcaaca
tacagcgccccaggggaagatcccctgtcgatgcgtgtcgtggttggcaaaaagtccaac
cagaccaatttcttctacgacaagatcgaaatcgtggaatacaacccgtactggggcgtg
ccgtattcgattatcgtcaacgagatgttgcctaaactggcaaaggacccgagctatctg
gatcgtgcgggatacgaagtgacaacggctggagggcggaaagtatcgtcttcgtccgtc
aattggtatgccgtcgcttcaaaacaacagacgatcaatgtccgccaatatccaggtcgt
tcgaatgcgcttggagaggtgaagatacttttcccgaacaggcaccatatctacatgcac
gacactccctcaaagagtcttttcaacaaagacgtgagggcgttcagccacggctgtatt
cgtctccatgacccaaaggccatggcggcggcggtgctggggaaatcgaaagattatgtc
agctcacgtatttcggctggacagaacgaacaggagaaagtgaccggagacctccctgtt
tacgtttcctactttactgcctggccagaacttgacggtacaatcgcctattataccgat
atttatgaccgcgatcggcacctcttgaaggcgcttgaaaaaaccgaagcggttagggcg
aaagcacgcgcgtcctaa
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