KEGG   Roseibium porphyridii: K1718_16675
Entry
K1718_16675       CDS       T09906                                 
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
  KO
K11900  type VI secretion system protein ImpC
Organism
rpop  Roseibium porphyridii
Brite
KEGG Orthology (KO) [BR:rpop00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:rpop02044]
    K1718_16675 (tssC)
Secretion system [BR:rpop02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   K1718_16675 (tssC)
SSDB
Motif
Pfam: VipB VipB_2 SH2_2 HK620_9_C
Other DBs
NCBI-ProteinID: WFE87791
UniProt: A0ABY8EXL0
LinkDB
Position
3581312..3582835
AA seq 507 aa
MSNTDTSAQTSGAAAGEVAGEKSPEEFASILKQNFRIKNENDTANELVDNAMSTFLSEAL
TDQALIKDDVYDTIDEMIAKLDEKLTEQVNEIIHAPEFQTLESAWRGLDYLVHQSETDAT
LKLQFLNISKKELAGVFKSYRGAKWDQSPLFKQIYEAEFGQLGGQPYGCLVGDYEFSYEP
QDITVLRGMAKIASAAHAPFLAAANPQLMQMDDWTELPAKRDLSKIFDTEIHAQWRTLRE
SEDARYLGLTMPRVLARQPYGAKSDPVEEFAFEEEFGEDTHQNYAWMNSAYAMAANVNRA
YKEYGWTVRIRGVESGGLVEDLPTHVFETDDGGVDQKCPAEVAISDRREHEISRLGLIPL
IHRKNTDQAAFLGAQSVFKPRQFSGPDGKDATASDNLSARLPYMFATTRFAHYLKVMVRN
KIGSTKEAAQLQRWLNDWIMDYVDGDPDNSTEETKARKPLREAKVTIVADEENPGYYRAQ
FFLRPHYQLEGMDIGMSLASRIPQDAS
NT seq 1524 nt   +upstreamnt  +downstreamnt
atgagcaacactgatacaagcgcccaaacgagcggcgcagcagcgggcgaagtcgcgggt
gaaaaaagcccagaagaatttgcctctatcttgaagcagaatttccgcatcaagaacgag
aacgacaccgccaacgaactcgtcgacaacgccatgtcgaccttcctttcggaagcactt
accgaccaggcgctcataaaggatgatgtctatgacaccatcgatgagatgatcgcaaag
ctggacgagaagctgacggaacaggtgaatgagatcattcacgcgcctgagttccagacg
ctggagagtgcctggcgtggacttgactatctggttcaccagtccgagacggacgcgacc
ctgaagcttcagttcctgaatatctctaaaaaggaactggcaggtgtcttcaagagttac
cgtggtgccaagtgggaccagagcccgctgttcaagcagatctatgaagctgagttcggt
cagcttggcggccagccatacgggtgccttgttggtgactacgagttctcctacgagccg
caggacatcaccgtattgcgcggcatggcaaagattgcatcagcggctcacgcgccgttc
cttgcagcagccaatccgcaactgatgcaaatggatgactggactgaacttcccgcaaaa
cgggatctatccaagattttcgatacggagatccacgcacaatggcggactttgcgggaa
tcggaagatgctcgctatctgggcctgaccatgcctcgcgtactggcgcggcagccctat
ggtgcaaagtccgacccggttgaagagttcgcgttcgaggaagagttcggtgaagacact
caccagaactacgcctggatgaactcggcctatgcaatggctgccaatgtcaaccgcgcc
tacaaggaatacggctggacagttcgtatccgcggcgtggaaagcggcggccttgtggaa
gacctaccaacgcacgtatttgagacagatgacggtggtgtcgaccagaaatgcccggcc
gaagttgcgatctccgatcgccgtgaacacgagatttcccgtttgggactgatcccgctg
atccaccgcaagaacacggaccaggctgccttcctgggcgcacagtccgtcttcaaaccg
cggcagttctcgggcccggacggcaaggatgcaaccgcatcggacaatctgtccgcgcgt
ctgccctacatgttcgcgaccacgcgttttgcccattacctgaaggtcatggtgcgcaac
aagattggttcgaccaaagaagcagcacagctgcaacgttggctgaacgactggatcatg
gactatgtcgatggtgatcctgacaattcaaccgaggaaaccaaagcgcgtaagccgctg
agggaagccaaggtgaccattgtcgctgacgaggaaaacccgggctactacagagctcag
ttcttcctgcgtccacactatcagctggaaggcatggacattggcatgagcctggcgtcc
cgcattccgcaagacgcaagctga

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