Roseibium porphyridii: K1718_17970
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Entry
K1718_17970 CDS
T09906
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
rpop
Roseibium porphyridii
Brite
KEGG Orthology (KO) [BR:
rpop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rpop03400
]
K1718_17970 (radA)
DNA repair and recombination proteins [BR:
rpop03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
K1718_17970 (radA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
AAA_16
Lon_C
AAA
AAA_22
DnaB_C
nSTAND3
SLFN-g3_helicase
RecA
AAA_30
ArsA_ATPase
NTPase_1
AAA_24
ATPase_2
NACHT
HepII_C
zf-RING_10
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
WFE88045
LinkDB
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Position
3889638..3891032
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AA seq
464 aa
AA seq
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MARRSTSFVCQSCGAVTAKWVGRCESCGDWNTIVEEQTGGGVGGGPGRASRSKGRVVPLV
GLSGDSKEAPRCETKVAELDRVTGGGFVRGSALLVGGDPGIGKSTLLIQAAAQLAHLGHK
TIYISGEEAIGQVRLRAERLGLADAPVALAAETSVEDILATLEADTAPALLILDSVQTLW
TDQVDSPPGTVTQVRASAQAMVRYAKKNGTTLVLVGHVTKDGQIAGPRVVEHMVDAVLYF
EGDGAHQYRILRSVKNRFGATDEIGVFEMTGKGLVEVPNPSALFLGDRNTSAPGAAVFAG
LEGSRPLLIEIQALVAQSSLGTPRRAVIGWDSARLSMILAVLEARCGVRFSQHDVYLNVA
GGLKISEPGADLAVAAALISSLSGLALPANCVYFGEVSLSGAIRPVAQAQSRLKEAEKLG
FDQAYCPEGNLKDNAASAFKATGLPELGDFVAKLSAEASASGRT
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgtcgctcgacttcctttgtttgccaatcctgcggcgcagttaccgcaaagtgg
gtcggtcgctgcgaatcctgcggggattggaacacgattgttgaagaacagaccggaggc
ggagtgggcggcggacccggacgagcctcccggagcaaaggccgggtggttccgctggtc
ggtctgtccggagacagcaaggaagcgccacgatgcgagaccaaggttgcggaacttgac
cgggtcactggtggcggatttgtgcgcgggtcggcactgcttgtcgggggtgatccgggc
atcggaaaatcgacactcctgatccaggcagcagcccaactggcgcatctcggtcacaag
acaatctatatttccggcgaagaagccattggtcaggtaaggctcagagccgaaagactt
ggtctggccgatgctcctgtcgctctggctgcagagacaagtgttgaagatattcttgca
acgcttgaagccgataccgctcccgctcttctgattctggattccgtacaaacgctctgg
accgaccaggttgattctcctcccggcacggtcacccaggtgcgcgcatcggctcaggcc
atggttcgttacgccaaaaagaacggaacgacactggtgctggtcggtcacgtgaccaag
gacggtcagattgctggcccgagggtcgtggaacacatggtcgacgcggtcctctatttc
gaaggcgatggtgcgcaccaataccggatattgcgttctgtgaagaaccgcttcggcgct
acagacgaaatcggcgtcttcgaaatgaccggcaaaggtctggtggaagtgccaaatcct
tctgccttgttccttggagaccgcaacacttcagccccgggagcagcggtttttgcgggt
ttagaaggctcacgtcccctgctgatcgaaatccaagcgcttgtcgcacaatcctcactt
ggaacaccgcgcagagcggttatcggttgggacagcgcgcgcttgtcgatgatccttgca
gtgctggaggcacgatgcggcgtgcgtttttcgcagcatgacgtttacctgaatgttgca
ggcggacttaaaatcagtgagcccggtgctgacctggctgtcgcggcagctctgatctct
tcactcagcgggcttgcccttccggccaattgcgtctatttcggcgaagtcagcctgtca
ggagccatccggccagtcgcccaggcccaatccaggctgaaagaagcggaaaaactcggc
ttcgatcaggcttattgtccggaaggaaacctgaaggacaacgccgcatcggctttcaaa
gccacaggactgccggaacttggggactttgttgccaaactttcggcagaggctagtgct
tcagggcggacctga
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