Roseibium porphyridii: K1718_18765
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Entry
K1718_18765 CDS
T09906
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
rpop
Roseibium porphyridii
Pathway
rpop00260
Glycine, serine and threonine metabolism
rpop00460
Cyanoamino acid metabolism
rpop00630
Glyoxylate and dicarboxylate metabolism
rpop00670
One carbon pool by folate
rpop00680
Methane metabolism
rpop01100
Metabolic pathways
rpop01110
Biosynthesis of secondary metabolites
rpop01120
Microbial metabolism in diverse environments
rpop01200
Carbon metabolism
rpop01230
Biosynthesis of amino acids
rpop01240
Biosynthesis of cofactors
rpop04981
Folate transport and metabolism
Module
rpop_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
rpop00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
K1718_18765
09102 Energy metabolism
00680 Methane metabolism
K1718_18765
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
K1718_18765
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
K1718_18765
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
K1718_18765
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
K1718_18765
Enzymes [BR:
rpop01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
K1718_18765
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
WFE88197
LinkDB
All DBs
Position
complement(4055027..4056337)
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AA seq
436 aa
AA seq
DB search
MSLMESSGQSLQSGFFTSGLSEADPDIFGTIEKELGRQQHEIELIASENIVSRAVLEAQG
SIFTNKYAEGYPGKRYYGGCEFADVAETLAIERAKELFGCNFANVQPNSGSQMNQAVFLA
LLQPGDTFMGLDLNSGGHLTHGSPVNMSGKWFNVVSYGVREDDHLLNMDDVERLAHEHKP
KLILAGGTAYSRVWDWKKFREIADSVGAYLMVDMAHIAGLVAGGVHPSPVPHAHVVTSTT
HKSLRGPRGGLILSNDEAIAKKINSAVFPGLQGGPLMHVIAAKAVAFKEALQPEFKAYAR
AVAENAKALSEALKEQGLDIVSGGTDNHLMLVDLRPKNATGKVAEKALGRANITCNKNGI
PFDPEKPFVTSGIRLGTPAATTRGFGVAEFREVGQLITEVLDGLKAANSEEGNAAVEAAV
KAKVEALTARFPIYGG
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgtctttgatggaaagctctggtcaatccctgcagtccggtttcttcacaagcggtctt
tcagaggctgatccggacattttcggcacgatcgaaaaagaattgggtcgtcagcagcat
gaaatcgaattgatcgcttcggaaaacattgtttcccgtgcggtgttggaagctcaaggc
tcgatcttcaccaacaaatatgccgaaggatacccgggcaagcggtattacggcggttgc
gaatttgccgatgtagccgaaacactggccatcgagcgtgccaaggaactgttcggttgt
aactttgccaacgtgcagccgaattccggtagccagatgaaccaggcagttttcctggcg
cttctgcagccgggcgatacattcatgggtcttgacctgaattctggtggtcacctcacg
catggctctcctgtcaacatgtccggtaagtggttcaatgtcgtctcgtatggtgttcgt
gaggatgaccatctgctcaacatggacgacgtcgagcgccttgcacatgaacacaagccg
aaactgatcctggcaggcggcaccgcctattcccgggtttgggattggaaaaagttccgt
gagattgccgacagcgtcggagcgtatctgatggtggacatggcccacattgcaggtctc
gtggcaggtggtgttcatccgtctccggttcctcacgctcacgtcgtgacgtcaacgacg
cacaaatccctgcgcggtccgcgcggcggccttatcctcagcaatgacgaagcgatcgcg
aaaaagatcaattctgccgtgttccccggacttcagggtggcccgctgatgcatgtgatt
gccgccaaggcagtggctttcaaggaagccttgcagcccgagttcaaagcctatgcacgc
gcggttgcggaaaatgcgaaggctttgtccgaggccttgaaagagcaggggctcgatatc
gtttccggcggaaccgacaaccacctgatgctggtcgatcttcgtcccaagaacgcgacc
ggcaaggtcgctgaaaaggcgcttggtcgggcgaacattacctgcaacaagaacggcatt
ccgttcgacccggaaaagccctttgttacatccggcattcgtcttggaacaccggcggca
acgacacgcggcttcggcgtagctgaattccgggaagttggtcagctgatcacggaagtg
ttggacggtttgaaggccgcaaacagtgaagagggcaacgcggcagttgaagcagccgtc
aaagccaaggtagaagcactgacggcccgcttcccgatttacgggggctga
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