Roseibium porphyridii: K1718_19040
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Entry
K1718_19040 CDS
T09906
Name
(GenBank) Lrp/AsnC family transcriptional regulator
KO
K05800
Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator
Organism
rpop
Roseibium porphyridii
Brite
KEGG Orthology (KO) [BR:
rpop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rpop03000
]
K1718_19040
Transcription factors [BR:
rpop03000
]
Prokaryotic type
Helix-turn-helix
Lrp/AsnC family
K1718_19040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AsnC_trans_reg
HTH_24
HTH_AsnC-type
HTH_Crp_2
HTH_20
HTH_11
MarR_2
NirdL-like_HTH
HTH_5
HTH_IclR
HTH_23
HTH_50
LexA_DNA_bind
DUF7343
HTH_Tnp_ISL3
HTH_3
HTH_31
RepL
SidC_lipid-bd
MarR
HemN_C
B-block_TFIIIC
Rrf2
GntR
DcaP
DUF6362
TrmB
DnaD_N
Motif
Other DBs
NCBI-ProteinID:
WFE88248
LinkDB
All DBs
Position
4115430..4115891
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AA seq
153 aa
AA seq
DB search
MEKKLDQIDRALVRALQREARLSQRELADEVGLSQNACWRRLKALHESGLIEGHTVRLNP
ARLGLNLTVFVMIRTRHHSKEWLKTFRDEVASIPNVIDFYRIAGDYDYMLKVVAEDMNAF
DRIYQRLIDKIDLDTVTSYMTMEAIADARDLPI
NT seq
462 nt
NT seq
+upstream
nt +downstream
nt
atggagaaaaaattagatcaaattgatcgtgcgctcgtcagggcattgcagcgtgaagcg
cgtctttcgcagagggaacttgctgacgaggttggcctttcccaaaatgcctgctggcgc
cgactgaaggctttgcacgagagcggacttatcgaagggcataccgtgcgtctgaaccct
gcccggcttggtctcaatcttactgtgttcgtgatgatccgaacacgtcaccattccaag
gaatggctaaagaccttccgcgatgaagtcgcgtcgatccccaacgtgatcgatttctat
cgaatcgccggggactacgactacatgctgaaagtggttgcggaggacatgaatgccttc
gaccgaatctatcaacgccttatcgacaagatcgatctcgacaccgtcacatcttacatg
accatggaagcgatcgcggacgcccgcgatcttccgatttag
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